Click here to switch to the map view.

The map label for this gene is 156977298

Identifier: 156977298

GI number: 156977298

Start: 1248166

End: 1248564

Strand: Reverse

Name: 156977298

Synonym: VIBHAR_06084

Alternate gene names: NA

Gene position: 1248564-1248166 (Counterclockwise)

Preceding gene: 156977300

Following gene: 156977296

Centisome position: 56.65

GC content: 44.61

Gene sequence:

>399_bases
TTGACGGATGCGAATGGATTGCCACTGGCTGTTGTTAGCGATGGCGCGAACGTCCACGACATTAAGCTGGTACTTCAAAC
ATTAGATGCACTAGAGTGTTATCGACCACCGCTGAAAGTGCCTTTGTACCTAGACAAAGGTTATACAGGTCAGTGGTTAC
ATGATGAACTGGTTGATTTGAACTACATCCCTCACGTTCAATCACGAGCAGAAGAGGCAGCGAACTTAAAACAATCGGAT
GATTTTAAGGCTCATCGTTGGGTTGTGGAGCGAACCCATAGCTGGTTAAACCGTTATCGTAGATTGCTTGTTCGTTGGGA
AAAGAAAATAGAAAACTACGAGGCCATGTTGCATTTTGCTTGCGGCCTCATTGTTTGGAATAAATCCCTTTTGGGATAG

Upstream 100 bases:

>100_bases
ATATCAATGGACGGGTGCCAAACTAAAGCACCTTTAGCTGGTCAAAAAAACAGGTAAGAATCCAACAGACCGAGCGAAAC
AAGGCGTAAAACGCATTTTG

Downstream 100 bases:

>100_bases
GTTCTAAGTCTTATATCGTAACAATTCTTATTATTTGCTGATTGGAAATTTTTTTGTTTTAAATAACCTTTCATGCTCTT
GGTCGATGATTTTCTGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTDANGLPLAVVSDGANVHDIKLVLQTLDALECYRPPLKVPLYLDKGYTGQWLHDELVDLNYIPHVQSRAEEAANLKQSD
DFKAHRWVVERTHSWLNRYRRLLVRWEKKIENYEAMLHFACGLIVWNKSLLG

Sequences:

>Translated_132_residues
MTDANGLPLAVVSDGANVHDIKLVLQTLDALECYRPPLKVPLYLDKGYTGQWLHDELVDLNYIPHVQSRAEEAANLKQSD
DFKAHRWVVERTHSWLNRYRRLLVRWEKKIENYEAMLHFACGLIVWNKSLLG
>Mature_131_residues
TDANGLPLAVVSDGANVHDIKLVLQTLDALECYRPPLKVPLYLDKGYTGQWLHDELVDLNYIPHVQSRAEEAANLKQSDD
FKAHRWVVERTHSWLNRYRRLLVRWEKKIENYEAMLHFACGLIVWNKSLLG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 15354; Mature: 15223

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDANGLPLAVVSDGANVHDIKLVLQTLDALECYRPPLKVPLYLDKGYTGQWLHDELVDL
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHCC
NYIPHVQSRAEEAANLKQSDDFKAHRWVVERTHSWLNRYRRLLVRWEKKIENYEAMLHFA
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CGLIVWNKSLLG
HHHHHHHHHHCC
>Mature Secondary Structure 
TDANGLPLAVVSDGANVHDIKLVLQTLDALECYRPPLKVPLYLDKGYTGQWLHDELVDL
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHCC
NYIPHVQSRAEEAANLKQSDDFKAHRWVVERTHSWLNRYRRLLVRWEKKIENYEAMLHFA
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CGLIVWNKSLLG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650732 [H]