| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977296
Identifier: 156977296
GI number: 156977296
Start: 1247686
End: 1247976
Strand: Reverse
Name: 156977296
Synonym: VIBHAR_06082
Alternate gene names: NA
Gene position: 1247976-1247686 (Counterclockwise)
Preceding gene: 156977298
Following gene: 156977295
Centisome position: 56.62
GC content: 45.02
Gene sequence:
>291_bases ATGCTACGCACCATGAAAATTGTACTGACTCTTGAACAAAAGCAGCAACTCGAACAGATGCACGACACTGAGCGTGATAG TCGTGTGTGCGACCGTATAAAAGCCGTTTTACTGGCTTCCGAGGGTTGGAGTCAGGTCATGATATCTCAAGCTCTTCGTA TTCATGAATCGACCGTTGCCCGTCATCTTAGTGATTATGTTCTCTCTGAAAAACTTAAACCTGAGAATGGTGGTAGCCAG AGCCGACTTTCTGAAATTCAAACGATGCAGCTCATCGAGCATTTGACTTAG
Upstream 100 bases:
>100_bases TTTTCTGTAACGTAGTGCTGATATTGCTATAGCTATGATTGACTATTTGGTCTATACCCGTGATCATTGAAGATGCTTGA TTTCTCATTAATTCAGGATC
Downstream 100 bases:
>100_bases AAAACCTACTTTCATACGCGTCAAATCGTTGCTTACATCGAGACGGAATTCGGCGTGAGCTACACCGTTGCAGGAGAAAT GGCCCCCAATTTTCGGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MLRTMKIVLTLEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVARHLSDYVLSEKLKPENGGSQ SRLSEIQTMQLIEHLT
Sequences:
>Translated_96_residues MLRTMKIVLTLEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVARHLSDYVLSEKLKPENGGSQ SRLSEIQTMQLIEHLT >Mature_96_residues MLRTMKIVLTLEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVARHLSDYVLSEKLKPENGGSQ SRLSEIQTMQLIEHLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11074; Mature: 11074
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTMKIVLTLEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RHLSDYVLSEKLKPENGGSQSRLSEIQTMQLIEHLT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRTMKIVLTLEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RHLSDYVLSEKLKPENGGSQSRLSEIQTMQLIEHLT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA