| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977287
Identifier: 156977287
GI number: 156977287
Start: 1241384
End: 1241857
Strand: Reverse
Name: 156977287
Synonym: VIBHAR_06073
Alternate gene names: NA
Gene position: 1241857-1241384 (Counterclockwise)
Preceding gene: 156977291
Following gene: 156977286
Centisome position: 56.35
GC content: 40.08
Gene sequence:
>474_bases ATGAAGATGCATAATGTATTTAAAACTCACCGAAAGATAGAAGTCGACAACTGTATCTCATTAGGAGATACCTTGCCGCA GAGTTCTTTTATTGAATTCCCAACATATAAACTCAAAAGCGCGGAGTTGCTTTGGGTTAACAAGTCACTAGTTGAATCGT ATGGTCTTAATCCTGATGATCGAAAAGTTAGTGAATGTATCTTAGCGAACTATTCATACGTAGCTAAAGGTTATTGCGAT AAAAAGTATATTTTCACTAGTGATAGCAAACCTTTCTTGGCTGACCGATATGGTTCACGTCATGAGGTGTGTAATAGTGG TAGCGCCCGCTGTGGTCTCAATGGGCAATTCCAAATAAAGGGAATTGGTGTTAATCCATTGCTAGCCGACAACATGAAAG AGACACATACGAATGGAAAGCTTTTCACAGATGAAGCGATACTTGAGGCTATTTGGGAGAGGCTGCGAGCTTGA
Upstream 100 bases:
>100_bases GGCGAAATTCATTAGATCAGAATGAGCGATGCGCGTCTACTCATTGTTTTATATGGAAATTATGAGGGGATTCGTAAGGT TAAGGTGAAAGGCGCAAGAT
Downstream 100 bases:
>100_bases AACAATCGGATGATTTTAAGGCTCATCGTTGGGTTGTGGAGCGAACTCATAGCTGGCTAAACCGTTATCGTAGATTGCTT GTTCGTTGGGAAAAGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKMHNVFKTHRKIEVDNCISLGDTLPQSSFIEFPTYKLKSAELLWVNKSLVESYGLNPDDRKVSECILANYSYVAKGYCD KKYIFTSDSKPFLADRYGSRHEVCNSGSARCGLNGQFQIKGIGVNPLLADNMKETHTNGKLFTDEAILEAIWERLRA
Sequences:
>Translated_157_residues MKMHNVFKTHRKIEVDNCISLGDTLPQSSFIEFPTYKLKSAELLWVNKSLVESYGLNPDDRKVSECILANYSYVAKGYCD KKYIFTSDSKPFLADRYGSRHEVCNSGSARCGLNGQFQIKGIGVNPLLADNMKETHTNGKLFTDEAILEAIWERLRA >Mature_157_residues MKMHNVFKTHRKIEVDNCISLGDTLPQSSFIEFPTYKLKSAELLWVNKSLVESYGLNPDDRKVSECILANYSYVAKGYCD KKYIFTSDSKPFLADRYGSRHEVCNSGSARCGLNGQFQIKGIGVNPLLADNMKETHTNGKLFTDEAILEAIWERLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17805; Mature: 17805
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMHNVFKTHRKIEVDNCISLGDTLPQSSFIEFPTYKLKSAELLWVNKSLVESYGLNPDD CCCHHHHHHHCEECCCHHHHCCCCCCCCCCCCCCCEECCCCEEEEECHHHHHHCCCCCCH RKVSECILANYSYVAKGYCDKKYIFTSDSKPFLADRYGSRHEVCNSGSARCGLNGQFQIK HHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCHHHCCCCHHHHHCCCCCCCCCCCEEEEE GIGVNPLLADNMKETHTNGKLFTDEAILEAIWERLRA EECCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHCC >Mature Secondary Structure MKMHNVFKTHRKIEVDNCISLGDTLPQSSFIEFPTYKLKSAELLWVNKSLVESYGLNPDD CCCHHHHHHHCEECCCHHHHCCCCCCCCCCCCCCCEECCCCEEEEECHHHHHHCCCCCCH RKVSECILANYSYVAKGYCDKKYIFTSDSKPFLADRYGSRHEVCNSGSARCGLNGQFQIK HHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCHHHCCCCHHHHHCCCCCCCCCCCEEEEE GIGVNPLLADNMKETHTNGKLFTDEAILEAIWERLRA EECCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA