| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is yjjG [C]
Identifier: 156977264
GI number: 156977264
Start: 1226423
End: 1227085
Strand: Reverse
Name: yjjG [C]
Synonym: VIBHAR_06050
Alternate gene names: 156977264
Gene position: 1227085-1226423 (Counterclockwise)
Preceding gene: 156977266
Following gene: 156977263
Centisome position: 55.67
GC content: 40.87
Gene sequence:
>663_bases ATGTATAACACGATTGTATTTGATATGGATATGACACTGTGCTATCCAACTAAATGTTTTGATGAAGTGTTTTTCGAGGT TTTTAAGGCTCCCATTGATTCATGCCAACCAGAATGGTTTGAAAAGATCACTATCAACGGAGTTTGTACTGGCAAAGAAG CAGTTGATCATTGTTTTCCTGCATATTCGGCTGCCGAAAAAGACAGGCTCTTTCAAGAGTTGTCTCATCAATGGGCGAGC CATCAATGTTTGTATGAAGGAGTGTTGAGTCTACCGAAAAAGTTGAAAGACAAGTACGGTTGTAGGGTTGGTATTATGAC CAATGGTCCCTCTGCTTTCCAACATGCTATTTTAGAACACCTAATGCTCAAGGATGTCTTTGATTTTTGTTATGCGAGTG GCGACATTGGCGTTGGGATTAGGAAACCTAGTGAGTCACTCATTAGTCTGCTGCAAGAAAAAGAAGGCATTATACCGGAT AAGGCATTGTTTGTTGGGGACTCTTTCAACAAGGATATTAAGCCTGCTATAAAATGCGGATGGTCAGGTCTGTTAGTTTC TCCGACCAACTCAAGTGTCCAGCGCTTTACCTTCGCTGATGTTCAAGAAGCTATACAGTCAGGTTCATGTTTAGAGATAA ATTGGATGGAGCTCAATAACTGA
Upstream 100 bases:
>100_bases CAAAATGGAGCTTTTTATTTGGTTTCATCTGACGATCCTGAGCATGTAAAAGAAGACTTTCAAATGTTTAAAAAACACCA GTTTTTCAGCTAGGTAAATT
Downstream 100 bases:
>100_bases GCTTGTAAATACAACTCGAACTCGACTCCCCAAATATTCAATATTACTTTTTAAAGGTGAGCCTGAATTCTATAGAAACA AGCTTAATATCGTCATGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MYNTIVFDMDMTLCYPTKCFDEVFFEVFKAPIDSCQPEWFEKITINGVCTGKEAVDHCFPAYSAAEKDRLFQELSHQWAS HQCLYEGVLSLPKKLKDKYGCRVGIMTNGPSAFQHAILEHLMLKDVFDFCYASGDIGVGIRKPSESLISLLQEKEGIIPD KALFVGDSFNKDIKPAIKCGWSGLLVSPTNSSVQRFTFADVQEAIQSGSCLEINWMELNN
Sequences:
>Translated_220_residues MYNTIVFDMDMTLCYPTKCFDEVFFEVFKAPIDSCQPEWFEKITINGVCTGKEAVDHCFPAYSAAEKDRLFQELSHQWAS HQCLYEGVLSLPKKLKDKYGCRVGIMTNGPSAFQHAILEHLMLKDVFDFCYASGDIGVGIRKPSESLISLLQEKEGIIPD KALFVGDSFNKDIKPAIKCGWSGLLVSPTNSSVQRFTFADVQEAIQSGSCLEINWMELNN >Mature_220_residues MYNTIVFDMDMTLCYPTKCFDEVFFEVFKAPIDSCQPEWFEKITINGVCTGKEAVDHCFPAYSAAEKDRLFQELSHQWAS HQCLYEGVLSLPKKLKDKYGCRVGIMTNGPSAFQHAILEHLMLKDVFDFCYASGDIGVGIRKPSESLISLLQEKEGIIPD KALFVGDSFNKDIKPAIKCGWSGLLVSPTNSSVQRFTFADVQEAIQSGSCLEINWMELNN
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24750; Mature: 24750
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNTIVFDMDMTLCYPTKCFDEVFFEVFKAPIDSCQPEWFEKITINGVCTGKEAVDHCFP CCCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCHHHHHEEEECEEECCHHHHHHHHH AYSAAEKDRLFQELSHQWASHQCLYEGVLSLPKKLKDKYGCRVGIMTNGPSAFQHAILEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH LMLKDVFDFCYASGDIGVGIRKPSESLISLLQEKEGIIPDKALFVGDSFNKDIKPAIKCG HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHCC WSGLLVSPTNSSVQRFTFADVQEAIQSGSCLEINWMELNN CCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECC >Mature Secondary Structure MYNTIVFDMDMTLCYPTKCFDEVFFEVFKAPIDSCQPEWFEKITINGVCTGKEAVDHCFP CCCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCHHHHHEEEECEEECCHHHHHHHHH AYSAAEKDRLFQELSHQWASHQCLYEGVLSLPKKLKDKYGCRVGIMTNGPSAFQHAILEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH LMLKDVFDFCYASGDIGVGIRKPSESLISLLQEKEGIIPDKALFVGDSFNKDIKPAIKCG HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHCC WSGLLVSPTNSSVQRFTFADVQEAIQSGSCLEINWMELNN CCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA