| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977262
Identifier: 156977262
GI number: 156977262
Start: 1224869
End: 1225219
Strand: Reverse
Name: 156977262
Synonym: VIBHAR_06048
Alternate gene names: NA
Gene position: 1225219-1224869 (Counterclockwise)
Preceding gene: 156977263
Following gene: 156977259
Centisome position: 55.59
GC content: 42.45
Gene sequence:
>351_bases ATGCTATGGATTGTAACCAAGTACCTGACAACCGCTGCTATTGTGGTACTAATATCTGAAGTCGCAAAGCGAAGCGATAG ATTAGGCGCATTGGTTGCCGCATTGCCTACCGTGACCATACTGGCGTTGGTTTGGATGTATATCGAAGGGCAGGGAACGG AGAAACTGTCTAATCATGCGTTTTATACTTTTTGGTTTGTTGTGCCAACACTGCCAATGTTTCTTCTTTTCCCTTACCTA CTCAGTAAGTATTCCTTTTGGACCACTTTACTGATCAGTTGCATCGTGTCTGTCGTTTGCTTTGCTATAACCAACTTGAT AGCTAAACAGTTTGGTATCAACTTGCTATAA
Upstream 100 bases:
>100_bases GAGCAAATAGTGGATTTGATAGCTCACACATGACCAGTAATTAACTGCGTGTGGGATTGAGTGATTATGGACGAGCGCAT CATCGATCAGGAGGATTGAC
Downstream 100 bases:
>100_bases CGCTCCGCTAAACATCTTTATTATTTCCTCAAGTTGAGCTCTGGGGACGCGTCTTTATGTTTGCTTATAAAAGGGGTGGC AAACATGAATACCTTGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLWIVTKYLTTAAIVVLISEVAKRSDRLGALVAALPTVTILALVWMYIEGQGTEKLSNHAFYTFWFVVPTLPMFLLFPYL LSKYSFWTTLLISCIVSVVCFAITNLIAKQFGINLL
Sequences:
>Translated_116_residues MLWIVTKYLTTAAIVVLISEVAKRSDRLGALVAALPTVTILALVWMYIEGQGTEKLSNHAFYTFWFVVPTLPMFLLFPYL LSKYSFWTTLLISCIVSVVCFAITNLIAKQFGINLL >Mature_116_residues MLWIVTKYLTTAAIVVLISEVAKRSDRLGALVAALPTVTILALVWMYIEGQGTEKLSNHAFYTFWFVVPTLPMFLLFPYL LSKYSFWTTLLISCIVSVVCFAITNLIAKQFGINLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13068; Mature: 13068
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWIVTKYLTTAAIVVLISEVAKRSDRLGALVAALPTVTILALVWMYIEGQGTEKLSNHA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCH FYTFWFVVPTLPMFLLFPYLLSKYSFWTTLLISCIVSVVCFAITNLIAKQFGINLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLWIVTKYLTTAAIVVLISEVAKRSDRLGALVAALPTVTILALVWMYIEGQGTEKLSNHA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCH FYTFWFVVPTLPMFLLFPYLLSKYSFWTTLLISCIVSVVCFAITNLIAKQFGINLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA