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The map label for this gene is 156977259

Identifier: 156977259

GI number: 156977259

Start: 1223800

End: 1224324

Strand: Reverse

Name: 156977259

Synonym: VIBHAR_06045

Alternate gene names: NA

Gene position: 1224324-1223800 (Counterclockwise)

Preceding gene: 156977262

Following gene: 156977254

Centisome position: 55.55

GC content: 43.62

Gene sequence:

>525_bases
GTGTCCGAGCGGAAGTATGATCTAATTCAAAGGAAGAAAATGATGGAATCAGCCATCCAGCAGGCCATTGAGCTACGCAA
AGCGTCCAACTACCAAGAGTCTAGAGCGTTGCTCACAACGCTATTAGGTGATGAGAATTACGCGGCGAAAGCTCACCTGC
ATATTGCATGGTCTTCCGATAATGAAGGTAAAGAACAAGAAGCCATTAAGCACTATACGGCGTCTCTTGAAGGGATACTT
TCTGCTGATGAAAGGTTTGATGCTTTATTTGGTCTCGCGAGTACTTACCGTAGTCTTGGAGAGTACCAAGAAGCACTAAG
TTACTTCGAGCAAACCATCAACGAATACCCTAATGCGGTAGAAGTTCAGACGTTTTACGCGATGTGTTTATACAACCTCG
GTCGTCATAAAGAAGCAACGTCGTTATTACTAGAGTTATTGGTTTCAACCACGAACAGTGAAGCCATTAAAGCGTATCAG
CTTGCGATCTCTCTGTATGCAAAAGACTTAGATAGAAAGTGGTAG

Upstream 100 bases:

>100_bases
ATATGCCTCTGTCTTTGGTTACTGATGTTGTGTTCTTGCCAGCAGATTTAGTCATGTTATTTACTCCGACGACGAGCTAC
GGAAGTGTTTTGTCCCAAGG

Downstream 100 bases:

>100_bases
TTTGAACCTTCCTACCAACAGGCGATCTAAAAGATCGCCTGTTTTTTATCTTTGATATACCCGTTCAACTTGAAGATGCA
GGCTTCAATATCTGAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Repeat Protein; Tetratricopeptide Tpr_2 Repeat Protein; Chloramphenicol Acetyltransferase

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSERKYDLIQRKKMMESAIQQAIELRKASNYQESRALLTTLLGDENYAAKAHLHIAWSSDNEGKEQEAIKHYTASLEGIL
SADERFDALFGLASTYRSLGEYQEALSYFEQTINEYPNAVEVQTFYAMCLYNLGRHKEATSLLLELLVSTTNSEAIKAYQ
LAISLYAKDLDRKW

Sequences:

>Translated_174_residues
MSERKYDLIQRKKMMESAIQQAIELRKASNYQESRALLTTLLGDENYAAKAHLHIAWSSDNEGKEQEAIKHYTASLEGIL
SADERFDALFGLASTYRSLGEYQEALSYFEQTINEYPNAVEVQTFYAMCLYNLGRHKEATSLLLELLVSTTNSEAIKAYQ
LAISLYAKDLDRKW
>Mature_173_residues
SERKYDLIQRKKMMESAIQQAIELRKASNYQESRALLTTLLGDENYAAKAHLHIAWSSDNEGKEQEAIKHYTASLEGILS
ADERFDALFGLASTYRSLGEYQEALSYFEQTINEYPNAVEVQTFYAMCLYNLGRHKEATSLLLELLVSTTNSEAIKAYQL
AISLYAKDLDRKW

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19922; Mature: 19790

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERKYDLIQRKKMMESAIQQAIELRKASNYQESRALLTTLLGDENYAAKAHLHIAWSSD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCC
NEGKEQEAIKHYTASLEGILSADERFDALFGLASTYRSLGEYQEALSYFEQTINEYPNAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EVQTFYAMCLYNLGRHKEATSLLLELLVSTTNSEAIKAYQLAISLYAKDLDRKW
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SERKYDLIQRKKMMESAIQQAIELRKASNYQESRALLTTLLGDENYAAKAHLHIAWSSD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCC
NEGKEQEAIKHYTASLEGILSADERFDALFGLASTYRSLGEYQEALSYFEQTINEYPNAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EVQTFYAMCLYNLGRHKEATSLLLELLVSTTNSEAIKAYQLAISLYAKDLDRKW
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA