| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yeeJ [C]
Identifier: 156977190
GI number: 156977190
Start: 1166697
End: 1169249
Strand: Reverse
Name: yeeJ [C]
Synonym: VIBHAR_05976
Alternate gene names: 156977190
Gene position: 1169249-1166697 (Counterclockwise)
Preceding gene: 156977191
Following gene: 156977188
Centisome position: 53.05
GC content: 49.98
Gene sequence:
>2553_bases GTGGAGAGAAGAGAAATGTGGCGAAAATCGATAGCAAGCTTGTTATTGCTTGTATTGTTTGGATGTGGCGGAGAAGGGGA TAAAGGGGATAACGCCTCCACCGCCACCGATAATGTTCTGGCCGATAATGTTCTGGCGCCTTTAGCCAGTGATGCCTTTA ACCAGTTGTCAATGGCGGATGGTCAAACGCAAGTGTCTTTGAAAGAATCGGTGGTTGACCCGCAAGGATTGCCGGTGACA CTGGAGTCGGTGACGGTGAGTCATGCTGATTGTCCAGCGCCCACGAGCATCAATCGAGAGCAACTCAGCTTTACGGTCGA AGCGAATGGGCCCGACATGTGTTTTTATGGTTATACGGTCAAAAACCATCCCAAAGAGATCGAGCACGCGAAGTCTGCGA GTGCGCAAAGCAATGTGATGATAAACTTGACCTCAGACCCCGCGCAGTTGGCACCAAAATCTAGGACGACGAATGTGGAT GAGACCATCACGATAGAGGTGCGTGACCCGGATTTAACCGCCGGTTATACCCTCGACCGTGAGGTTGTGGTGATGGGTGA TGGCGTCGCCAGTGGTAATAGCGAGACGGATGTAATCACTTATGAGGCGAACTCTCAGGGGGTGACACGTTTGGTGTACA CCATGACGAACGCCGATGGCAGTGCGCTTTTAGTGGGGACGGTTGACGTGGCGGTGTCAGGCCCCGGAAATCATGCGCCA GTGGCGACAGATGCGTCGTTTAGGATGGAATCTGATGACATCGAATCGCCCCAAACGCCCCAAACATTTGACCTCAGTGC TTATGTTAGTGATGAGGATGATGGTGATGACATCCAGCTTATTCTAGTTGACGCGTGGAATGCGCAGGTTGATTTAGCGG CGCCGGATGACACTAGCAATCTTTCGTTTACCTTTAAACCGCGCCATGCTGGGTTTCACTATGTGACGTATGTGGTGACT GACCATAACGGCGGTTATGGTGTCGCGCAAGTAAAAATTGAGGTGGTTGACCTCTCTGCGGGGGCGACATGGGGAAATAT CCAGATGGGGCTTAAATTGTTTTTTGGTCCATTGACGAGCTCAGAAGCAGATTTACAAGGAGTCACTTCTACGAGTTCTA ATTTTGATAGTAATGATGCTGACGTGGCGACGTTTAACTTCGTTCGCGCTGAAGATTCCTGTCAAAGTAAGGGGCGCTTG CCGACTTCTGATGAACTAAAGGCGCTTGCCCAATACATAATTTCCGACGGTTGGCCGGTGGATTTGGCTTATTGGGCGAA TAATAATGGTACTGGTGAGCTGATTGATTTGAAGAACAACGGGTCAGTGGTACCGGAAACCAACCCTGGTGGTTACTATG TGTCTTGCATGAATGAAGCGGGCCTTGTTGTGGTGGACGCCGATTCTAGGCTTGAGGCGGTAGCGGATGATGCCGAACAG GCAGTCGTAGCGGTGAAGCTGACTCTGGACGATATGCCCGTAGAAGGTCAGTTGATTGAGGCGTCAGCCCCCGACCGGAC TAATGTGACCTTTGACGATACAACTCTCTATACAAACGACAAAGGGGTAGCCAAGTTTGCCTTAAACACTTGGGAAGCAG GACAGGTTCCGGTCAATATCAAGTACGACGGCGAAACGTTGTTGACGCAAAATGTGACGTTTGTTGCGGATGAAGCTACT GCTCGTTTAGTGCTTGAGGTAACCAAAAATAATGCACCATATGATGATTCAACTGGTAATGAGGTTGAGGCTACAATGGT GGACGACAATAACAATCCGTTGGTGGGGCGCCCGGTAACCTTTACGTCGCCTGAGGAACAATCTGTCACCATTAATAAGG GCTCTGAAGTTACGGATGCTACGGGTAAGCAGAACGCATCAGTGGTTTGGAAGGATAGTTCGACAACTGATGCCTCTACA ACTGTTACTGTCACCGGAAGTTATACCCCCCAATCTACGGGAACTCAAATTTCAGAAACCGCCGAGATAACGTTTATTTC ACCAGAGCCACTGAAGACTTGTGGTGAAATAAACGACACCAACAAAAGCAATGCTGCAGGCAACTGTCTGAAAATTGCTA CTGGTGCTCTTGGATACTGGTTTACCAGCACGCCAAGCATTGAAGTGATGAACCAGCTTGGGTATAGCATAAACGAAGAG AGCAACAACACTGGTGATACATATGCAGCTTCCTATGTCGAGACTGGAGTTTTGGGGCCTGACGGTGGTGAGTTTGCGCT ATTTATGCAGAATGGTGATGGTGTCTCTCTCCCTGGTGTTAACGGGCAGTTTGACCGTTGGTGCCAAAAGCTTAATGTTT TACGGTTTGGTGGAAGATCAACATGGGAGCGCCCAACAATGTATGAGTTGAACTCACTTTATTCCGCTCATGGCAACCTG TGGACAACGCGTGGTTGGCCGACCTGGGGCGTTTACTGGTCGTCGGATGTCATTGGTAAGGGCTACAACGCTTTGCACTT CTACTCTGGCGTCCCCAGCACCACCATCCCGGGCGCCTGGAACTCCGCGTCCTGCGTCTCAAAACATCCTTAG
Upstream 100 bases:
>100_bases AGCGTGAGGATGGACTCATGATTGCAACGCGAACCTTGCTTGTGATGGTGGCTTATATGATAGCCGCGAATGTGTTGATG CTCATCGCCTTTGGCGCATA
Downstream 100 bases:
>100_bases TGTTTTACGTTCAGCGTTTAACGTTTAAATTTTAATATTTTTGGCGCCATCCTTATGGTTGGCGCCTTATTCTCGGAGTT TATTTTGTGAATATTGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 850; Mature: 850
Protein sequence:
>850_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVT LESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVD ETITIEVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP VATDASFRMESDDIESPQTPQTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPRHAGFHYVTYVVT DHNGGYGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRL PTSDELKALAQYIISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQ AVVAVKLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNIKYDGETLLTQNVTFVADEAT ARLVLEVTKNNAPYDDSTGNEVEATMVDDNNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDAST TVTVTGSYTPQSTGTQISETAEITFISPEPLKTCGEINDTNKSNAAGNCLKIATGALGYWFTSTPSIEVMNQLGYSINEE SNNTGDTYAASYVETGVLGPDGGEFALFMQNGDGVSLPGVNGQFDRWCQKLNVLRFGGRSTWERPTMYELNSLYSAHGNL WTTRGWPTWGVYWSSDVIGKGYNALHFYSGVPSTTIPGAWNSASCVSKHP
Sequences:
>Translated_850_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVT LESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVD ETITIEVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP VATDASFRMESDDIESPQTPQTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPRHAGFHYVTYVVT DHNGGYGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRL PTSDELKALAQYIISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQ AVVAVKLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNIKYDGETLLTQNVTFVADEAT ARLVLEVTKNNAPYDDSTGNEVEATMVDDNNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDAST TVTVTGSYTPQSTGTQISETAEITFISPEPLKTCGEINDTNKSNAAGNCLKIATGALGYWFTSTPSIEVMNQLGYSINEE SNNTGDTYAASYVETGVLGPDGGEFALFMQNGDGVSLPGVNGQFDRWCQKLNVLRFGGRSTWERPTMYELNSLYSAHGNL WTTRGWPTWGVYWSSDVIGKGYNALHFYSGVPSTTIPGAWNSASCVSKHP >Mature_850_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVT LESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVD ETITIEVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP VATDASFRMESDDIESPQTPQTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPRHAGFHYVTYVVT DHNGGYGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRL PTSDELKALAQYIISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQ AVVAVKLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNIKYDGETLLTQNVTFVADEAT ARLVLEVTKNNAPYDDSTGNEVEATMVDDNNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDAST TVTVTGSYTPQSTGTQISETAEITFISPEPLKTCGEINDTNKSNAAGNCLKIATGALGYWFTSTPSIEVMNQLGYSINEE SNNTGDTYAASYVETGVLGPDGGEFALFMQNGDGVSLPGVNGQFDRWCQKLNVLRFGGRSTWERPTMYELNSLYSAHGNL WTTRGWPTWGVYWSSDVIGKGYNALHFYSGVPSTTIPGAWNSASCVSKHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90989; Mature: 90989
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMAD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GQTQVSLKESVVDPQGLPVTLESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTV CCEEEEHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHEEEEEECCCCCEEEEEEEE KNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETITIEVRDPDLTAGYTLDR CCCCHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEECC EVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP EEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCC VATDASFRMESDDIESPQTPQTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSN EECCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCC LSFTFKPRHAGFHYVTYVVTDHNGGYGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTS EEEEECCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCC SEADLQGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRLPTSDELKALAQYIISDGWPV CCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHCCCCCE DLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQ EEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHCCCCC AVVAVKLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNI EEEEEEEEECCCCCCCEEEECCCCCCCCEEECCCEEEECCCCEEEEEEECCCCCCEEEEE KYDGETLLTQNVTFVADEATARLVLEVTKNNAPYDDSTGNEVEATMVDDNNNPLVGRPVT EECCCEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEECCCEE FTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDASTTVTVTGSYTPQSTGTQISET ECCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCEECCC AEITFISPEPLKTCGEINDTNKSNAAGNCLKIATGALGYWFTSTPSIEVMNQLGYSINEE EEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHCCCEECCC SNNTGDTYAASYVETGVLGPDGGEFALFMQNGDGVSLPGVNGQFDRWCQKLNVLRFGGRS CCCCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHCCEEEECCCC TWERPTMYELNSLYSAHGNLWTTRGWPTWGVYWSSDVIGKGYNALHFYSGVPSTTIPGAW CCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCC NSASCVSKHP CCCCCCCCCC >Mature Secondary Structure MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMAD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GQTQVSLKESVVDPQGLPVTLESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTV CCEEEEHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHEEEEEECCCCCEEEEEEEE KNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETITIEVRDPDLTAGYTLDR CCCCHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEECC EVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP EEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCC VATDASFRMESDDIESPQTPQTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSN EECCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCC LSFTFKPRHAGFHYVTYVVTDHNGGYGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTS EEEEECCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCC SEADLQGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRLPTSDELKALAQYIISDGWPV CCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHCCCCCE DLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQ EEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHCCCCC AVVAVKLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNI EEEEEEEEECCCCCCCEEEECCCCCCCCEEECCCEEEECCCCEEEEEEECCCCCCEEEEE KYDGETLLTQNVTFVADEATARLVLEVTKNNAPYDDSTGNEVEATMVDDNNNPLVGRPVT EECCCEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEECCCEE FTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDASTTVTVTGSYTPQSTGTQISET ECCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCEECCC AEITFISPEPLKTCGEINDTNKSNAAGNCLKIATGALGYWFTSTPSIEVMNQLGYSINEE EEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHCCCEECCC SNNTGDTYAASYVETGVLGPDGGEFALFMQNGDGVSLPGVNGQFDRWCQKLNVLRFGGRS CCCCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHCCEEEECCCC TWERPTMYELNSLYSAHGNLWTTRGWPTWGVYWSSDVIGKGYNALHFYSGVPSTTIPGAW CCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCC NSASCVSKHP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA