| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977153
Identifier: 156977153
GI number: 156977153
Start: 1124197
End: 1124376
Strand: Reverse
Name: 156977153
Synonym: VIBHAR_05939
Alternate gene names: NA
Gene position: 1124376-1124197 (Counterclockwise)
Preceding gene: 156977154
Following gene: 156977152
Centisome position: 51.01
GC content: 40.0
Gene sequence:
>180_bases GTGTTTGATGCTCTACTTAGTGAGCGTTGCTATAAACGTGCTTGGACAATTGAGGAAGTGGGTGAACTATTCAAGCGTGA GCAAGGCAAACACGCTGACACAGCCCTGAGTCAATTACTACTGGATAATTTAGATGACTTTATAGAAGTACGCTTTATGT ATCCAGATAACGATATTTAA
Upstream 100 bases:
>100_bases TAAAACATGACTGAGCGTTTACTGCACATGGCCACATATACAATACGGGTTACCCGATTGGTTTGAAGGGTGAAGAGATT CATCTCTTTGCACTGCGGAT
Downstream 100 bases:
>100_bases ATCAATCTATCATTGCCGAGTGAAGTTTCATATTTCTAACTTATGGGGCTTCATTCGGTGATCTTGCTTAGAAAAACGTT AATTCCCTTTTCTCATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Two-Component Response Regulator; Two Component Response Regulator
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MFDALLSERCYKRAWTIEEVGELFKREQGKHADTALSQLLLDNLDDFIEVRFMYPDNDI
Sequences:
>Translated_59_residues MFDALLSERCYKRAWTIEEVGELFKREQGKHADTALSQLLLDNLDDFIEVRFMYPDNDI >Mature_59_residues MFDALLSERCYKRAWTIEEVGELFKREQGKHADTALSQLLLDNLDDFIEVRFMYPDNDI
Specific function: Unknown
COG id: COG3437
COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7011; Mature: 7011
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDALLSERCYKRAWTIEEVGELFKREQGKHADTALSQLLLDNLDDFIEVRFMYPDNDI CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCC >Mature Secondary Structure MFDALLSERCYKRAWTIEEVGELFKREQGKHADTALSQLLLDNLDDFIEVRFMYPDNDI CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA