| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yieH [H]
Identifier: 156977152
GI number: 156977152
Start: 1123286
End: 1123999
Strand: Reverse
Name: yieH [H]
Synonym: VIBHAR_05938
Alternate gene names: 156977152
Gene position: 1123999-1123286 (Counterclockwise)
Preceding gene: 156977153
Following gene: 156977151
Centisome position: 51.0
GC content: 45.52
Gene sequence:
>714_bases TTGTTCAACGAATGGTTTGAGATATTTGTTGGCGGGGGAAGGCGTATGGCTATCAACAATATTAAGTGCGTCATATTCGA TTGTGACGGTACGCTGGTCGACAGCGAAAGCCTGTGTTGCCATGCATTGGTTAATGTGTTTGAGCAATACGGCGTAGAGA TGAGTTTTGAAGAGTGTGTTGCACATTTCAAAGGTGGCAAGTTGGCCGATATCCTGCGTGATGCCAAAGCGTTCATGAAC GTTAATGTGTCTATTGATGTTCTTGAACCACAATACCGTGAGGAGCTACAGAAGCTGTTTGTCCGCCACCTAAAACCAAT GGATGGCGCAAAGCGTCTTATTCAATTCTTGGATTCACACAACATCGAGTATTGTGTGGCTTCTAATGGACCGAAAGACA AGATCGAATACTCGCTTGAGCTAACAGGGCTGCTAGATGCGTTTAAAGGAAAAGTCTTTTCTGCTTTCGACGCGAATAGT TGGAAGCCAGAGCCTGATTTGATCATGTATAGCGCGATGAATATGGGTTTTCTGCCAAGCGATTGTTTGTATATTGATGA CACCCCAAAGGGCGTTGAGGCTGGATTAAACGCAGGTGTGAAAACGGTGCAGCTTTACAACGGCGCGCCAATCAACCGAG TGGGAGACGAGCGCGTTATCCGAATTCATCATCTTGACGAACTAAAAGAGCAGCTCTTAGGCTGCTCAATTTAA
Upstream 100 bases:
>100_bases TCTACGAAATGCCAAGTCTGTCGTTTAAACATTTCAAAACTTACCTATTATGTTGATACATATTTAGTACAAATAAATAA GTTAATAAGAACAACGTTAA
Downstream 100 bases:
>100_bases TGACAAACGTTACTCAAGCTATGGATATGTTTGAATTTGGCTTGTAGCAACGGAGTTTGGTGTAAGCATTGGATGGAAGA GAAGTTTTTCGTATGGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MFNEWFEIFVGGGRRMAINNIKCVIFDCDGTLVDSESLCCHALVNVFEQYGVEMSFEECVAHFKGGKLADILRDAKAFMN VNVSIDVLEPQYREELQKLFVRHLKPMDGAKRLIQFLDSHNIEYCVASNGPKDKIEYSLELTGLLDAFKGKVFSAFDANS WKPEPDLIMYSAMNMGFLPSDCLYIDDTPKGVEAGLNAGVKTVQLYNGAPINRVGDERVIRIHHLDELKEQLLGCSI
Sequences:
>Translated_237_residues MFNEWFEIFVGGGRRMAINNIKCVIFDCDGTLVDSESLCCHALVNVFEQYGVEMSFEECVAHFKGGKLADILRDAKAFMN VNVSIDVLEPQYREELQKLFVRHLKPMDGAKRLIQFLDSHNIEYCVASNGPKDKIEYSLELTGLLDAFKGKVFSAFDANS WKPEPDLIMYSAMNMGFLPSDCLYIDDTPKGVEAGLNAGVKTVQLYNGAPINRVGDERVIRIHHLDELKEQLLGCSI >Mature_237_residues MFNEWFEIFVGGGRRMAINNIKCVIFDCDGTLVDSESLCCHALVNVFEQYGVEMSFEECVAHFKGGKLADILRDAKAFMN VNVSIDVLEPQYREELQKLFVRHLKPMDGAKRLIQFLDSHNIEYCVASNGPKDKIEYSLELTGLLDAFKGKVFSAFDANS WKPEPDLIMYSAMNMGFLPSDCLYIDDTPKGVEAGLNAGVKTVQLYNGAPINRVGDERVIRIHHLDELKEQLLGCSI
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=214, Percent_Identity=34.1121495327103, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI87082080, Length=209, Percent_Identity=26.7942583732057, Blast_Score=63, Evalue=1e-11, Organism=Drosophila melanogaster, GI17137324, Length=209, Percent_Identity=28.2296650717703, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45550911, Length=233, Percent_Identity=25.7510729613734, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 26669; Mature: 26669
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNEWFEIFVGGGRRMAINNIKCVIFDCDGTLVDSESLCCHALVNVFEQYGVEMSFEECV CCCCEEEEEECCCCEEEECCEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCHHHHH AHFKGGKLADILRDAKAFMNVNVSIDVLEPQYREELQKLFVRHLKPMDGAKRLIQFLDSH HHHCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC NIEYCVASNGPKDKIEYSLELTGLLDAFKGKVFSAFDANSWKPEPDLIMYSAMNMGFLPS CCEEEEECCCCCCCEEEEEEHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCC DCLYIDDTPKGVEAGLNAGVKTVQLYNGAPINRVGDERVIRIHHLDELKEQLLGCSI CCEEECCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCCC >Mature Secondary Structure MFNEWFEIFVGGGRRMAINNIKCVIFDCDGTLVDSESLCCHALVNVFEQYGVEMSFEECV CCCCEEEEEECCCCEEEECCEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCHHHHH AHFKGGKLADILRDAKAFMNVNVSIDVLEPQYREELQKLFVRHLKPMDGAKRLIQFLDSH HHHCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC NIEYCVASNGPKDKIEYSLELTGLLDAFKGKVFSAFDANSWKPEPDLIMYSAMNMGFLPS CCEEEEECCCCCCCEEEEEEHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCC DCLYIDDTPKGVEAGLNAGVKTVQLYNGAPINRVGDERVIRIHHLDELKEQLLGCSI CCEEECCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]