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The map label for this gene is 156977075

Identifier: 156977075

GI number: 156977075

Start: 1047341

End: 1049089

Strand: Reverse

Name: 156977075

Synonym: VIBHAR_05860

Alternate gene names: NA

Gene position: 1049089-1047341 (Counterclockwise)

Preceding gene: 156977076

Following gene: 156977074

Centisome position: 47.6

GC content: 46.88

Gene sequence:

>1749_bases
TTGAGTAACAGTAAATACTTTCAAGATGAACTCACGTATTTGCGTGAGTCGGGTAGTGAGTTTGCCAAATATCATCCGAA
GTTAACTCACTTTCTCTCTGAAGGAACCTTCGACCCAGACGTCGAGCGACTGCTGGAAGGTTTCGCTTTTCTGACTGGGC
GTATTCGAGAGAAGATCGACGACGAACTGCCAGAACTCACGCAATCTCTGATGACTTTGCTGTGGCCGCATTACATGCGT
TCAATTCCGTCTTTGTGCATCAGTGAGCTAAAACCGCATACCGGAAGTGTTACTGAGAAAACGGTGGTAAAACGTGGTGC
AGAAATGGCCAGTGAGCAAGTCGAGGGCACGCAATGCCTTTTCCGCACTTGCTACGATGTGAACCTATACCCAATCACGA
TCACCAATATTGAACAAACCAACAGCCGCACCAGTTCAGCGATTGATGTAACGTTGTCGACGGAGCATGGTCTAGAGCTG
TCTCGAATTGGTTTAGATACGTTGCGTTTGCACTTGCATGGTGAAATTTATGTTACTCGCACTGTGTTTCTCTGGCTGTT
CCGCTACTTGGATTACGTGGAGCTGGATGTCGGTGGCGGCTACAAACATCGCTTGGGGCCAGAATATGTCAAGCCGGTAG
GGCATGAAGAAGACGAAGCGCTGCTGCCTTATAGCAAAAACTCTTTCGCAGGATACCGCTTGTTGCAAGAGTTTTTCTCT
TTGCCTGAGAAGTTCATGTTCTTCGATATTCAAGGTCTAGAGTGGTTAAAAGGCATTCCTCAGCGCAGTACAGTGAAAGT
GAAATTCTTCTTTAAGCGCGCATTGCCTTCAGAGGTTGTGCTTAAAGATAAACACCTCAGGCTGCATTGTACCCCTGCTG
TGAACTTATTTGAAAAAGATGGCGATCCAATTCGTTTGGAGCATCGTCGCAATGAATACAAAGTACGCCCTCAAAGCAAT
ACTCAAGACCACTATGAAGTCTACGGAATTGAGCAGGTCGAGAGTTGGAGCAAAGACGAGCGTCGCCGTAAACCATTGAT
CGAATTCGAATCGTTTGAGCACCAAATTAACCAGCGTGATAAGCGAGAGTTCTACAAATCAAAAGTCGGCGAGCGAGTAA
GCGGAAGAGGGTTAGAGCGCTATATTTCGTTCCATACGCATAATGGTGATATTGCGGATTTAGGTACAGAAACTGTACTG
ATGAAACTGCAATGTAGCAACGCCGATCTGGCTGAGCGCCTTTCAGTGGGCGACATTACTTACGCGACCCACAAATCGCC
GACGTACGCGACATTTAAAAATATCACCAAGCCGACACAATCGGTGAGCCCACAGGTGAACGGTGAGCTTCAGTGGCAGC
TGATCGCCAATATGTCACTCAACTATTTGTCATTGGCGAACATTGATGTGTTGAAAGTGCTGCTCTCGACTTATGACTTC
CATTCTCGTGTCGATAGACAAGCTCACCGCGCGTCGATTCACCGACTCGATGGTATTGTGTCGTCTGAGATGAAACCGAT
TGACCGCGTGTTCCGTGGCGTATCTGTACGTGGTAACCAATTTAAGCTGGTGACCAATTCGAAGTTCTTCGTAAATGAAG
GCGATATGTTCCTGATGGCAACCGTACTCAATGAATTCATCCGTTTGTATTCGAGTGTGAACTCCTTTACTGAATTGGAG
GTCTTTGATGAAGCGACAGGTGAAGTGTACAACTGGGCAAGCCTGATTGGACAGCAGACGATTCTATGA

Upstream 100 bases:

>100_bases
GGTATTCGCGGCGAAGTTTCCCATAACGGCGGTAAAGTCCCAATGTCGATCGATGTCTACATGGGAACCGACGGCCAATT
TAACGTTTAGTAGGTGCCAC

Downstream 100 bases:

>100_bases
TTACAACACTTACTGATAAGTCGTATGAGTTCAGCTTCTATCAAGCGGTATTGTTGCTTGAGAAGCACTACCAGCTAGAG
CCAAATTCTAACTTTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; LOW QUALITY PROTEIN Type VI Secretion Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MSNSKYFQDELTYLRESGSEFAKYHPKLTHFLSEGTFDPDVERLLEGFAFLTGRIREKIDDELPELTQSLMTLLWPHYMR
SIPSLCISELKPHTGSVTEKTVVKRGAEMASEQVEGTQCLFRTCYDVNLYPITITNIEQTNSRTSSAIDVTLSTEHGLEL
SRIGLDTLRLHLHGEIYVTRTVFLWLFRYLDYVELDVGGGYKHRLGPEYVKPVGHEEDEALLPYSKNSFAGYRLLQEFFS
LPEKFMFFDIQGLEWLKGIPQRSTVKVKFFFKRALPSEVVLKDKHLRLHCTPAVNLFEKDGDPIRLEHRRNEYKVRPQSN
TQDHYEVYGIEQVESWSKDERRRKPLIEFESFEHQINQRDKREFYKSKVGERVSGRGLERYISFHTHNGDIADLGTETVL
MKLQCSNADLAERLSVGDITYATHKSPTYATFKNITKPTQSVSPQVNGELQWQLIANMSLNYLSLANIDVLKVLLSTYDF
HSRVDRQAHRASIHRLDGIVSSEMKPIDRVFRGVSVRGNQFKLVTNSKFFVNEGDMFLMATVLNEFIRLYSSVNSFTELE
VFDEATGEVYNWASLIGQQTIL

Sequences:

>Translated_582_residues
MSNSKYFQDELTYLRESGSEFAKYHPKLTHFLSEGTFDPDVERLLEGFAFLTGRIREKIDDELPELTQSLMTLLWPHYMR
SIPSLCISELKPHTGSVTEKTVVKRGAEMASEQVEGTQCLFRTCYDVNLYPITITNIEQTNSRTSSAIDVTLSTEHGLEL
SRIGLDTLRLHLHGEIYVTRTVFLWLFRYLDYVELDVGGGYKHRLGPEYVKPVGHEEDEALLPYSKNSFAGYRLLQEFFS
LPEKFMFFDIQGLEWLKGIPQRSTVKVKFFFKRALPSEVVLKDKHLRLHCTPAVNLFEKDGDPIRLEHRRNEYKVRPQSN
TQDHYEVYGIEQVESWSKDERRRKPLIEFESFEHQINQRDKREFYKSKVGERVSGRGLERYISFHTHNGDIADLGTETVL
MKLQCSNADLAERLSVGDITYATHKSPTYATFKNITKPTQSVSPQVNGELQWQLIANMSLNYLSLANIDVLKVLLSTYDF
HSRVDRQAHRASIHRLDGIVSSEMKPIDRVFRGVSVRGNQFKLVTNSKFFVNEGDMFLMATVLNEFIRLYSSVNSFTELE
VFDEATGEVYNWASLIGQQTIL
>Mature_581_residues
SNSKYFQDELTYLRESGSEFAKYHPKLTHFLSEGTFDPDVERLLEGFAFLTGRIREKIDDELPELTQSLMTLLWPHYMRS
IPSLCISELKPHTGSVTEKTVVKRGAEMASEQVEGTQCLFRTCYDVNLYPITITNIEQTNSRTSSAIDVTLSTEHGLELS
RIGLDTLRLHLHGEIYVTRTVFLWLFRYLDYVELDVGGGYKHRLGPEYVKPVGHEEDEALLPYSKNSFAGYRLLQEFFSL
PEKFMFFDIQGLEWLKGIPQRSTVKVKFFFKRALPSEVVLKDKHLRLHCTPAVNLFEKDGDPIRLEHRRNEYKVRPQSNT
QDHYEVYGIEQVESWSKDERRRKPLIEFESFEHQINQRDKREFYKSKVGERVSGRGLERYISFHTHNGDIADLGTETVLM
KLQCSNADLAERLSVGDITYATHKSPTYATFKNITKPTQSVSPQVNGELQWQLIANMSLNYLSLANIDVLKVLLSTYDFH
SRVDRQAHRASIHRLDGIVSSEMKPIDRVFRGVSVRGNQFKLVTNSKFFVNEGDMFLMATVLNEFIRLYSSVNSFTELEV
FDEATGEVYNWASLIGQQTIL

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67277; Mature: 67146

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSKYFQDELTYLRESGSEFAKYHPKLTHFLSEGTFDPDVERLLEGFAFLTGRIREKID
CCCCCHHHHHHHHHHHCCCHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
DELPELTQSLMTLLWPHYMRSIPSLCISELKPHTGSVTEKTVVKRGAEMASEQVEGTQCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
FRTCYDVNLYPITITNIEQTNSRTSSAIDVTLSTEHGLELSRIGLDTLRLHLHGEIYVTR
HHHHHCCEEEEEEEECCHHCCCCCCCEEEEEEECCCCCCHHHCCCEEEEEEECCEEEHHH
TVFLWLFRYLDYVELDVGGGYKHRLGPEYVKPVGHEEDEALLPYSKNSFAGYRLLQEFFS
HHHHHHHHHHCEEEEECCCCCCCCCCHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHC
LPEKFMFFDIQGLEWLKGIPQRSTVKVKFFFKRALPSEVVLKDKHLRLHCTPAVNLFEKD
CCHHEEEEECCCCHHHCCCCCCCEEEEEEEEHHCCCHHHEEECCCEEEEECCCCHHHHCC
GDPIRLEHRRNEYKVRPQSNTQDHYEVYGIEQVESWSKDERRRKPLIEFESFEHQINQRD
CCCEEEEECCCCEEECCCCCCCCCEEEEEHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHH
KREFYKSKVGERVSGRGLERYISFHTHNGDIADLGTETVLMKLQCSNADLAERLSVGDIT
HHHHHHHHHCCCCCCCCHHHHHEEECCCCCHHHCCCCEEEEEEECCCCCHHHHCCCCCEE
YATHKSPTYATFKNITKPTQSVSPQVNGELQWQLIANMSLNYLSLANIDVLKVLLSTYDF
EECCCCCCHHHHHHCCCCHHHCCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHH
HSRVDRQAHRASIHRLDGIVSSEMKPIDRVFRGVSVRGNQFKLVTNSKFFVNEGDMFLMA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCEEEEECCCHHHHH
TVLNEFIRLYSSVNSFTELEVFDEATGEVYNWASLIGQQTIL
HHHHHHHHHHHHHCCHHEEEHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNSKYFQDELTYLRESGSEFAKYHPKLTHFLSEGTFDPDVERLLEGFAFLTGRIREKID
CCCCHHHHHHHHHHHCCCHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
DELPELTQSLMTLLWPHYMRSIPSLCISELKPHTGSVTEKTVVKRGAEMASEQVEGTQCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
FRTCYDVNLYPITITNIEQTNSRTSSAIDVTLSTEHGLELSRIGLDTLRLHLHGEIYVTR
HHHHHCCEEEEEEEECCHHCCCCCCCEEEEEEECCCCCCHHHCCCEEEEEEECCEEEHHH
TVFLWLFRYLDYVELDVGGGYKHRLGPEYVKPVGHEEDEALLPYSKNSFAGYRLLQEFFS
HHHHHHHHHHCEEEEECCCCCCCCCCHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHC
LPEKFMFFDIQGLEWLKGIPQRSTVKVKFFFKRALPSEVVLKDKHLRLHCTPAVNLFEKD
CCHHEEEEECCCCHHHCCCCCCCEEEEEEEEHHCCCHHHEEECCCEEEEECCCCHHHHCC
GDPIRLEHRRNEYKVRPQSNTQDHYEVYGIEQVESWSKDERRRKPLIEFESFEHQINQRD
CCCEEEEECCCCEEECCCCCCCCCEEEEEHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHH
KREFYKSKVGERVSGRGLERYISFHTHNGDIADLGTETVLMKLQCSNADLAERLSVGDIT
HHHHHHHHHCCCCCCCCHHHHHEEECCCCCHHHCCCCEEEEEEECCCCCHHHHCCCCCEE
YATHKSPTYATFKNITKPTQSVSPQVNGELQWQLIANMSLNYLSLANIDVLKVLLSTYDF
EECCCCCCHHHHHHCCCCHHHCCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHH
HSRVDRQAHRASIHRLDGIVSSEMKPIDRVFRGVSVRGNQFKLVTNSKFFVNEGDMFLMA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCEEEEECCCHHHHH
TVLNEFIRLYSSVNSFTELEVFDEATGEVYNWASLIGQQTIL
HHHHHHHHHHHHHCCHHEEEHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA