| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977033
Identifier: 156977033
GI number: 156977033
Start: 1005021
End: 1007501
Strand: Direct
Name: 156977033
Synonym: VIBHAR_05818
Alternate gene names: NA
Gene position: 1005021-1007501 (Clockwise)
Preceding gene: 156977032
Following gene: 156977034
Centisome position: 45.6
GC content: 43.53
Gene sequence:
>2481_bases ATGAAACAAACATTTAAACTATCACTTCTTTGTTCTGCTATTCTTCTAGCAGGTTGTGGTGACGATACATCTAGCTCTGG AACATCAGATAGCCCAGTGTTTGAAGATAGTGTTCAAGAGCTTCTCGGGCGTGACGCTTCGATAGACTTTGTACTTCAAG GTGTGAATGCCGCAGTACCTTTACCTTCTTTCCTACTATTTGACACAACAGATCATACTCTTAATATTCCTGTTCCAAGA GGCGAGTCCACTGGATTGGATAACCCTGTTGTAGCAATGGGTGAATCTGACGGTTGGAGCACAATGATGCCCTTCTCGTT TGATTTAAATTTAAAGGAAGGTGTTACGCTACTAAATGACATCGTCTTAGTAAACGGCTCACCTTTTAGTCAAAACTTAA ACAGCGGGGTACGTGTTGCAAAAGTTGATGTAGACCTGTCAACGGGGGCAATCAGCAACTTCCAACCTCTGACTCCCGGC GTTGACTTCCTTGCTGTTAGCACAGACTTAAAGAGTATTAATGTTATACCTCTGAAAGGTTTTGATCCTGCCTCTAACTA CATTTACGCGCTTACTGAGTCAATCAAAGACAGTAACAATGCGGGTCTTGGTACATCTACTTCATACGCGAGTTTAAAAA CAGCCACGGCTCAAACGGGAACGCTTGCTGCGCCTCAACAAGTAATTTGGAACATAGAAAACACGTTTGCAGAAAATGGA CAAGTAGAAAGTAAAGACCAAATCATCTATTCATCTTGGTTCACAACCGCTTCTGCTGGTAACGTGATGCAAGGGACTAA AGCAGCTATTGCCACTTCGATTAACCCGAAAATAAAACCAGCCGGGGTATGGAAAGGCACTGCTAACCCTAATAATATTT CAACAGATGACTTGAATAGCCTATACACCATTGATGCCGATGATACTGGCGTTAATTTCGGCGATGCCGTAACAAACGAT CCTCTATTTGCAAGTGCGTTTGGAACAGATAGCGCGGCTCTTTTGAAAGCGAAATATGACGCGCTGACTATGGCTCCAAC TCTCGACTCTATTGAAGTCTATCGTGGTACCGTAAAACTTCCTTATTTCCTAAGCGATCAAGTTGATGGCGATGCGTGGA AAATGCAGCCATGGCGAAGTGGTATGCCTAGCATTTTCAAGATCCTTAACACTCTAAGTTCAGGCTCCGATGCTGATAAA GCTGCAATTTCTGAACAACTGATTGCGTTAGGCTTTACGTCATTGCCGGATCAACTTTTGATTCCTCAATATCAGGCCTT ACTGGTTGGCTCGGAATTGACGCTAGCTAATGGTAATCAACTAGACGCAGAGCGAATCCTTACACAATATAGTGCGGTTC CTCAAATTAGAGCAGTAAAAGAAGCACCTTTCATCATGTTCGTACCAAAAGGCATGGGTACTGACAACGTACCATTACTT CAGTACCAGCATGGGATTACAAACCTTAAAGAAAGCGCATATGCTTTAGCTCTAAGTCATATCAGCACTGCAGTGCAAAC TAGCAAGATTCCGTATGCTTTAATAGCTATTGACCAACCTCTGCATGGTCAGCGAGGTCTATCTGAAGAAATCGTTACTA CGCCATCCAACCCTACTGTATTCATGAACCTAGAATATCTGCCTGTAGCGCGCGATAACATTCGTCAAGGTGCAATAGAT GGAATGGGATTAAGATATGCAATGAATTATGTAGCGCCATCAGAAGCGGCGTTCTCGACTGTAAATGAGGATAATGTGTC ACTTATTGGTCATTCAATTGGTGCTATTACGGGTATCAGTTCATACGCTGTTGCAAATACTTCACTAAACAGCCCGGTTG ACCCAATGTTTAGCTATACAACAGCAACATTAGCAAACCCAGGTGGCGGCATTGCGCCATTTCTGCTTGAATCTGGCTCA TTCGCTCCTGTAATCAAACACAGCGTCGTCGCATCTTCAGTAGAAGCATATACGAGCTACTACGCTACAACGTGTGTTGC AGAGGGTATCGATCCTGGAACTTGCTACAACAAGTTTTACGATGAAATCGCCGACGCCTCTACAAAAGATATCATTGATG CAACGCTAACCTCATTCACATATGCTGCACAAACTGTTCTTGATAACGTAGATCCTTTCAACATGGCATCTCAAGTTACC GGCTCAGTTTTAGGCATTCAAGCTAATGGGGACAACACGATCCCAAATAATGTATCTACAACACCTACTGCAGGTACAGA ACCGCTGTTTAGTAAGCTAGGACTAGAAAACACCGCTCTGGACGCATCAGGTACGCGAGTAGCTTCGTATTTTGACGAGT CTTCAAATGCACAGCACTCTACAGTCATCACTCCTGGATCGGCTGAAGAAGGCCCTGCTCATGTAGAAATGAGCTCTCAA ATTGTTCAGTTTACCTTAACGAACGGCAATAGTGATGGTAGTTTATCCGTTACATCTGGCTTATTGGACGCAAGCAAATA A
Upstream 100 bases:
>100_bases TTGAAAGAAGAGATAACGTTTGATTCAGAAGGTACTGCTTACATCAGTGCTGTTCAAGTGAACTACATCTTCAAATAATC AGAATTAAAGGAGTAAACCA
Downstream 100 bases:
>100_bases GTACAACTAAACTAACCAAAGCCCAGTTTCGACTGGGCTTTTTCGTTTCTACGCTATCAAACCCTCAGTGACTTTCTCTG CTATAGTTAAATCGTTGTCT
Product: extracellular lipase
Products: NA
Alternate protein names: Extracellular Lipase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Extracellular Lipase Pla-1/Cef Family
Number of amino acids: Translated: 826; Mature: 826
Protein sequence:
>826_residues MKQTFKLSLLCSAILLAGCGDDTSSSGTSDSPVFEDSVQELLGRDASIDFVLQGVNAAVPLPSFLLFDTTDHTLNIPVPR GESTGLDNPVVAMGESDGWSTMMPFSFDLNLKEGVTLLNDIVLVNGSPFSQNLNSGVRVAKVDVDLSTGAISNFQPLTPG VDFLAVSTDLKSINVIPLKGFDPASNYIYALTESIKDSNNAGLGTSTSYASLKTATAQTGTLAAPQQVIWNIENTFAENG QVESKDQIIYSSWFTTASAGNVMQGTKAAIATSINPKIKPAGVWKGTANPNNISTDDLNSLYTIDADDTGVNFGDAVTND PLFASAFGTDSAALLKAKYDALTMAPTLDSIEVYRGTVKLPYFLSDQVDGDAWKMQPWRSGMPSIFKILNTLSSGSDADK AAISEQLIALGFTSLPDQLLIPQYQALLVGSELTLANGNQLDAERILTQYSAVPQIRAVKEAPFIMFVPKGMGTDNVPLL QYQHGITNLKESAYALALSHISTAVQTSKIPYALIAIDQPLHGQRGLSEEIVTTPSNPTVFMNLEYLPVARDNIRQGAID GMGLRYAMNYVAPSEAAFSTVNEDNVSLIGHSIGAITGISSYAVANTSLNSPVDPMFSYTTATLANPGGGIAPFLLESGS FAPVIKHSVVASSVEAYTSYYATTCVAEGIDPGTCYNKFYDEIADASTKDIIDATLTSFTYAAQTVLDNVDPFNMASQVT GSVLGIQANGDNTIPNNVSTTPTAGTEPLFSKLGLENTALDASGTRVASYFDESSNAQHSTVITPGSAEEGPAHVEMSSQ IVQFTLTNGNSDGSLSVTSGLLDASK
Sequences:
>Translated_826_residues MKQTFKLSLLCSAILLAGCGDDTSSSGTSDSPVFEDSVQELLGRDASIDFVLQGVNAAVPLPSFLLFDTTDHTLNIPVPR GESTGLDNPVVAMGESDGWSTMMPFSFDLNLKEGVTLLNDIVLVNGSPFSQNLNSGVRVAKVDVDLSTGAISNFQPLTPG VDFLAVSTDLKSINVIPLKGFDPASNYIYALTESIKDSNNAGLGTSTSYASLKTATAQTGTLAAPQQVIWNIENTFAENG QVESKDQIIYSSWFTTASAGNVMQGTKAAIATSINPKIKPAGVWKGTANPNNISTDDLNSLYTIDADDTGVNFGDAVTND PLFASAFGTDSAALLKAKYDALTMAPTLDSIEVYRGTVKLPYFLSDQVDGDAWKMQPWRSGMPSIFKILNTLSSGSDADK AAISEQLIALGFTSLPDQLLIPQYQALLVGSELTLANGNQLDAERILTQYSAVPQIRAVKEAPFIMFVPKGMGTDNVPLL QYQHGITNLKESAYALALSHISTAVQTSKIPYALIAIDQPLHGQRGLSEEIVTTPSNPTVFMNLEYLPVARDNIRQGAID GMGLRYAMNYVAPSEAAFSTVNEDNVSLIGHSIGAITGISSYAVANTSLNSPVDPMFSYTTATLANPGGGIAPFLLESGS FAPVIKHSVVASSVEAYTSYYATTCVAEGIDPGTCYNKFYDEIADASTKDIIDATLTSFTYAAQTVLDNVDPFNMASQVT GSVLGIQANGDNTIPNNVSTTPTAGTEPLFSKLGLENTALDASGTRVASYFDESSNAQHSTVITPGSAEEGPAHVEMSSQ IVQFTLTNGNSDGSLSVTSGLLDASK >Mature_826_residues MKQTFKLSLLCSAILLAGCGDDTSSSGTSDSPVFEDSVQELLGRDASIDFVLQGVNAAVPLPSFLLFDTTDHTLNIPVPR GESTGLDNPVVAMGESDGWSTMMPFSFDLNLKEGVTLLNDIVLVNGSPFSQNLNSGVRVAKVDVDLSTGAISNFQPLTPG VDFLAVSTDLKSINVIPLKGFDPASNYIYALTESIKDSNNAGLGTSTSYASLKTATAQTGTLAAPQQVIWNIENTFAENG QVESKDQIIYSSWFTTASAGNVMQGTKAAIATSINPKIKPAGVWKGTANPNNISTDDLNSLYTIDADDTGVNFGDAVTND PLFASAFGTDSAALLKAKYDALTMAPTLDSIEVYRGTVKLPYFLSDQVDGDAWKMQPWRSGMPSIFKILNTLSSGSDADK AAISEQLIALGFTSLPDQLLIPQYQALLVGSELTLANGNQLDAERILTQYSAVPQIRAVKEAPFIMFVPKGMGTDNVPLL QYQHGITNLKESAYALALSHISTAVQTSKIPYALIAIDQPLHGQRGLSEEIVTTPSNPTVFMNLEYLPVARDNIRQGAID GMGLRYAMNYVAPSEAAFSTVNEDNVSLIGHSIGAITGISSYAVANTSLNSPVDPMFSYTTATLANPGGGIAPFLLESGS FAPVIKHSVVASSVEAYTSYYATTCVAEGIDPGTCYNKFYDEIADASTKDIIDATLTSFTYAAQTVLDNVDPFNMASQVT GSVLGIQANGDNTIPNNVSTTPTAGTEPLFSKLGLENTALDASGTRVASYFDESSNAQHSTVITPGSAEEGPAHVEMSSQ IVQFTLTNGNSDGSLSVTSGLLDASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87191; Mature: 87191
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTFKLSLLCSAILLAGCGDDTSSSGTSDSPVFEDSVQELLGRDASIDFVLQGVNAAVP CCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCC LPSFLLFDTTDHTLNIPVPRGESTGLDNPVVAMGESDGWSTMMPFSFDLNLKEGVTLLND CCCEEEEECCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEECCEEECCCHHHCCEEEEE IVLVNGSPFSQNLNSGVRVAKVDVDLSTGAISNFQPLTPGVDFLAVSTDLKSINVIPLKG EEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECC FDPASNYIYALTESIKDSNNAGLGTSTSYASLKTATAQTGTLAAPQQVIWNIENTFAENG CCCCCCEEEEEEHHHCCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHCCHHHHHCCCC QVESKDQIIYSSWFTTASAGNVMQGTKAAIATSINPKIKPAGVWKGTANPNNISTDDLNS CCCCCCCEEEEEEECCCCCCCCCCCCHHHEEECCCCCCCCCCEEECCCCCCCCCCCCCCC LYTIDADDTGVNFGDAVTNDPLFASAFGTDSAALLKAKYDALTMAPTLDSIEVYRGTVKL EEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHEEECCCEEEECCCCCCHHEEECEEEC PYFLSDQVDGDAWKMQPWRSGMPSIFKILNTLSSGSDADKAAISEQLIALGFTSLPDQLL CEEECCCCCCCEEECCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHH IPQYQALLVGSELTLANGNQLDAERILTQYSAVPQIRAVKEAPFIMFVPKGMGTDNVPLL CCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCCCEEE QYQHGITNLKESAYALALSHISTAVQTSKIPYALIAIDQPLHGQRGLSEEIVTTPSNPTV EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEECCCCCEE FMNLEYLPVARDNIRQGAIDGMGLRYAMNYVAPSEAAFSTVNEDNVSLIGHSIGAITGIS EEEEEEECCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCCCCEEEEEHHHHHHHCCC SYAVANTSLNSPVDPMFSYTTATLANPGGGIAPFLLESGSFAPVIKHSVVASSVEAYTSY HHEEECCCCCCCCCCHHHHHEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH YATTCVAEGIDPGTCYNKFYDEIADASTKDIIDATLTSFTYAAQTVLDNVDPFNMASQVT HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC GSVLGIQANGDNTIPNNVSTTPTAGTEPLFSKLGLENTALDASGTRVASYFDESSNAQHS CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCEEEEHHCCCCCCCCC TVITPGSAEEGPAHVEMSSQIVQFTLTNGNSDGSLSVTSGLLDASK EEECCCCCCCCCCEEEECCEEEEEEEECCCCCCCEEEECCCCCCCC >Mature Secondary Structure MKQTFKLSLLCSAILLAGCGDDTSSSGTSDSPVFEDSVQELLGRDASIDFVLQGVNAAVP CCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCC LPSFLLFDTTDHTLNIPVPRGESTGLDNPVVAMGESDGWSTMMPFSFDLNLKEGVTLLND CCCEEEEECCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEECCEEECCCHHHCCEEEEE IVLVNGSPFSQNLNSGVRVAKVDVDLSTGAISNFQPLTPGVDFLAVSTDLKSINVIPLKG EEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECC FDPASNYIYALTESIKDSNNAGLGTSTSYASLKTATAQTGTLAAPQQVIWNIENTFAENG CCCCCCEEEEEEHHHCCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHCCHHHHHCCCC QVESKDQIIYSSWFTTASAGNVMQGTKAAIATSINPKIKPAGVWKGTANPNNISTDDLNS CCCCCCCEEEEEEECCCCCCCCCCCCHHHEEECCCCCCCCCCEEECCCCCCCCCCCCCCC LYTIDADDTGVNFGDAVTNDPLFASAFGTDSAALLKAKYDALTMAPTLDSIEVYRGTVKL EEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHEEECCCEEEECCCCCCHHEEECEEEC PYFLSDQVDGDAWKMQPWRSGMPSIFKILNTLSSGSDADKAAISEQLIALGFTSLPDQLL CEEECCCCCCCEEECCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHH IPQYQALLVGSELTLANGNQLDAERILTQYSAVPQIRAVKEAPFIMFVPKGMGTDNVPLL CCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCCCEEE QYQHGITNLKESAYALALSHISTAVQTSKIPYALIAIDQPLHGQRGLSEEIVTTPSNPTV EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEECCCCCEE FMNLEYLPVARDNIRQGAIDGMGLRYAMNYVAPSEAAFSTVNEDNVSLIGHSIGAITGIS EEEEEEECCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCCCCEEEEEHHHHHHHCCC SYAVANTSLNSPVDPMFSYTTATLANPGGGIAPFLLESGSFAPVIKHSVVASSVEAYTSY HHEEECCCCCCCCCCHHHHHEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH YATTCVAEGIDPGTCYNKFYDEIADASTKDIIDATLTSFTYAAQTVLDNVDPFNMASQVT HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC GSVLGIQANGDNTIPNNVSTTPTAGTEPLFSKLGLENTALDASGTRVASYFDESSNAQHS CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCEEEEHHCCCCCCCCC TVITPGSAEEGPAHVEMSSQIVQFTLTNGNSDGSLSVTSGLLDASK EEECCCCCCCCCCEEEECCEEEEEEEECCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA