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The map label for this gene is ybgL [C]

Identifier: 156977010

GI number: 156977010

Start: 982649

End: 983404

Strand: Direct

Name: ybgL [C]

Synonym: VIBHAR_05795

Alternate gene names: 156977010

Gene position: 982649-983404 (Clockwise)

Preceding gene: 156977006

Following gene: 156977011

Centisome position: 44.58

GC content: 44.84

Gene sequence:

>756_bases
ATGACATTGAATAATCAGCAACTGACACTAAATTGCGACATGGGTGAAAGCTTTGGCGCATGGAAAATGGGCGCAGATGA
GTGCGTGATGCCTTTTGTCGATATGGCAAACATCGCTTGTGGTTTTCATGCTTCTGACCCAAATGTCATGCACGATACAA
TTACCCTTGCCAACCAACACGATGTAGAAATCGGCGCTCACCCAGGCTACCCGGACCTACAAGGTTTTGGGCGTCGCAGC
ATAAAAATGACCAACGACGAAATCACTAATATGGTGATTTACCAAGTCGGAGCTCTGCAAGCTTTGTGCAAAGCGCAATA
CACAGACATTGGCTATATCAAACCTCATGGTGCGCTGTACAACGATATGATGCAAAGTGATGGCGTTTTTCTTGCTGTCG
TCAAAGCTGTGGCGCTGTTTAAAGTGCCGTTGATGATTTTAGCCTCCAAAGAAAACGAAAAGTATCTCGAAATTGCTGAC
GATTTCGATGTGCCATTGCTGTTTGAAGCCTTTGCCGATCGTCTCTATCAAGATGATGGAATGCTCACACCAAGAACGCA
GCCTAATGCAGTATTAAACAGCGAACATGCCATTTTAGAACAAGTAAGAATGCTGGCAGAGTCTGGTCGGGTAAAAACCG
CTTCTGGTCAATACATTCTTCTAGAAGCCGACACAATTTGTGTCCATGGGGATAACAACGAATCCATCGCTCTCGTTCAA
AAGATTCGTCAAAGTCTCTACACCGGAGGAAATTAA

Upstream 100 bases:

>100_bases
ATCGTTCTATCAATAACCTTCTGCTCGAAAAATGAAGTTAGTCACTGAACTTAAACGCATTTTCCTGCATTTTTAAGCAT
ACTTTGGACTTTATAAACGT

Downstream 100 bases:

>100_bases
TGAATCAAGGGCAGTTTTCTATCTCTCCCATTTCTGAATGCAGCATCTTAATTCGATTCGACGACACCATTACTGTCGAA
CATATTGGTGAATTAGCGCA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTLNNQQLTLNCDMGESFGAWKMGADECVMPFVDMANIACGFHASDPNVMHDTITLANQHDVEIGAHPGYPDLQGFGRRS
IKMTNDEITNMVIYQVGALQALCKAQYTDIGYIKPHGALYNDMMQSDGVFLAVVKAVALFKVPLMILASKENEKYLEIAD
DFDVPLLFEAFADRLYQDDGMLTPRTQPNAVLNSEHAILEQVRMLAESGRVKTASGQYILLEADTICVHGDNNESIALVQ
KIRQSLYTGGN

Sequences:

>Translated_251_residues
MTLNNQQLTLNCDMGESFGAWKMGADECVMPFVDMANIACGFHASDPNVMHDTITLANQHDVEIGAHPGYPDLQGFGRRS
IKMTNDEITNMVIYQVGALQALCKAQYTDIGYIKPHGALYNDMMQSDGVFLAVVKAVALFKVPLMILASKENEKYLEIAD
DFDVPLLFEAFADRLYQDDGMLTPRTQPNAVLNSEHAILEQVRMLAESGRVKTASGQYILLEADTICVHGDNNESIALVQ
KIRQSLYTGGN
>Mature_250_residues
TLNNQQLTLNCDMGESFGAWKMGADECVMPFVDMANIACGFHASDPNVMHDTITLANQHDVEIGAHPGYPDLQGFGRRSI
KMTNDEITNMVIYQVGALQALCKAQYTDIGYIKPHGALYNDMMQSDGVFLAVVKAVALFKVPLMILASKENEKYLEIADD
FDVPLLFEAFADRLYQDDGMLTPRTQPNAVLNSEHAILEQVRMLAESGRVKTASGQYILLEADTICVHGDNNESIALVQK
IRQSLYTGGN

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=33.1967213114754, Blast_Score=164, Evalue=6e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5795_VIBHB (A7N8I1)

Other databases:

- EMBL:   CP000790
- RefSeq:   YP_001447916.1
- ProteinModelPortal:   A7N8I1
- SMR:   A7N8I1
- STRING:   A7N8I1
- GeneID:   5557323
- GenomeReviews:   CP000790_GR
- KEGG:   vha:VIBHAR_05795
- NMPDR:   fig|338187.4.peg.3413
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   GRRSMAC
- ProtClustDB:   PRK05406
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 27714; Mature: 27583

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNNQQLTLNCDMGESFGAWKMGADECVMPFVDMANIACGFHASDPNVMHDTITLANQH
CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHEECEECCCCCEEEHEEEECCCC
DVEIGAHPGYPDLQGFGRRSIKMTNDEITNMVIYQVGALQALCKAQYTDIGYIKPHGALY
CEEECCCCCCCCCHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHH
NDMMQSDGVFLAVVKAVALFKVPLMILASKENEKYLEIADDFDVPLLFEAFADRLYQDDG
HHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
MLTPRTQPNAVLNSEHAILEQVRMLAESGRVKTASGQYILLEADTICVHGDNNESIALVQ
CCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCEEEEEECEEEEECCCCCHHHHHH
KIRQSLYTGGN
HHHHHHCCCCC
>Mature Secondary Structure 
TLNNQQLTLNCDMGESFGAWKMGADECVMPFVDMANIACGFHASDPNVMHDTITLANQH
CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHEECEECCCCCEEEHEEEECCCC
DVEIGAHPGYPDLQGFGRRSIKMTNDEITNMVIYQVGALQALCKAQYTDIGYIKPHGALY
CEEECCCCCCCCCHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHH
NDMMQSDGVFLAVVKAVALFKVPLMILASKENEKYLEIADDFDVPLLFEAFADRLYQDDG
HHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
MLTPRTQPNAVLNSEHAILEQVRMLAESGRVKTASGQYILLEADTICVHGDNNESIALVQ
CCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCEEEEEECEEEEECCCCCHHHHHH
KIRQSLYTGGN
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA