Click here to switch to the map view.

The map label for this gene is 156976993

Identifier: 156976993

GI number: 156976993

Start: 965884

End: 967029

Strand: Reverse

Name: 156976993

Synonym: VIBHAR_05778

Alternate gene names: NA

Gene position: 967029-965884 (Counterclockwise)

Preceding gene: 156976994

Following gene: 156976992

Centisome position: 43.88

GC content: 47.47

Gene sequence:

>1146_bases
ATGACTACTGCAACTAACATCCTTAAGAAATTCGATGAGCAGTCTGTTCATATTGACTACCTATGTTTTACATTTGCAGT
CAAGGACTTACGCCATTGTCACAACGCGATTCAACGTCTTCACAAGCATGAGGAATACAAAGGTTTAGCGCCTAAATCGT
TGTTACAGCGTAACTGCAAAGCACCCAAGTTCCCTGCTCCACCTCAGTTTAATGCGACAATTGCGGGCACTGCTGAAGAG
ATTGAAGCGTACAACAACGCCTTTGATATCTGTTACCGCAATTACCTAGAAGATTGTTTGCGCATCTTCACCAATCAGGT
GCTTGGATTGTCTCTTTCTGCACCTCGTGGCCTTGGCTTTCAGTTCTATTCTGAGTCTATGAAGTTGACCTCACCAGACG
GTGAAGACTTCTGTGGTTTCGTGGGTATTGGCGGCAACAATGACACGGTGCATTTCCAAATTAATGGCACTGGTTGTAAG
CATGTGTTTGCTCGTCGTGCGCCTTGGTCGCTGCATGATTGGCTAACAAACGTTCTTGGTGTTCAAACACTCGCGCGTGT
CGATCTCGCTTACGATGATTACGACGGTATCTTTGATTGTGAATACGCGCGTAAAGCTTGGAACGACAACGCATTTCGAA
CGGCTGAACGTGGTCGTAATCCGGTTCTGCATGTTGACCATACGATTGCGGGCTTTCGTGATGGCCGTCCTGATTACACC
AAAGAGCAATACTCGATTGGCTCTCGTACTTCTCGTATTTACTGGCGTATCTACAACAAGGCTCTTGAGCAGAAACTCGC
GAACACGGGTCTTGTTTGGTACCGCTCAGAAGTTGAACTTAAAAAATGGAACATCGATGTGCTGTTGAATCCTGCTGGCG
CATTCGCGGCCATCAACGACTTCGCAGCGTCGATTTCTACTGCAAAACAATTCAATACAAAACCTGTCCCGACTAAACGT
GCGGCGCTAGACCTGTTGGCTTCGGCTCACTGGATGCGTCGCCAGTACGGGAAAATCCTGAACTCTTTAATCGAATTCCA
TGAGGGCGACATTGAAACCGTTGTCGGCTCGCTCGTCCGTGATGGAACCAAATTCACCTTCCCCGATACCTACGGCAAGT
TGGTGACTCACATATTGGAGACCTAA

Upstream 100 bases:

>100_bases
TCTCATCTCGAATCTTGGGCTTCGTCTGAATTTGTCTCTTACGAGTTGGTATCTATCACCAACACCACTTACCAAGAACG
CGTTGATTTAGGGGTCTTCG

Downstream 100 bases:

>100_bases
CAAATGGCTAAATCTGTTTTTGTCCTAGGCATGGACATCACTTGGAACTCGGCACGTGGTGACAGTGCTCAACTGAACAT
CTCACGTCCACTACGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Replication Initiation Factor Family Protein; Transcriptional Regulatory Protein RstA; Replication Protein; Phage Replication Protein; Rep-VSK; Phage Replication Initiation Factor; Phage Replication And Integration Protein

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTTATNILKKFDEQSVHIDYLCFTFAVKDLRHCHNAIQRLHKHEEYKGLAPKSLLQRNCKAPKFPAPPQFNATIAGTAEE
IEAYNNAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGFQFYSESMKLTSPDGEDFCGFVGIGGNNDTVHFQINGTGCK
HVFARRAPWSLHDWLTNVLGVQTLARVDLAYDDYDGIFDCEYARKAWNDNAFRTAERGRNPVLHVDHTIAGFRDGRPDYT
KEQYSIGSRTSRIYWRIYNKALEQKLANTGLVWYRSEVELKKWNIDVLLNPAGAFAAINDFAASISTAKQFNTKPVPTKR
AALDLLASAHWMRRQYGKILNSLIEFHEGDIETVVGSLVRDGTKFTFPDTYGKLVTHILET

Sequences:

>Translated_381_residues
MTTATNILKKFDEQSVHIDYLCFTFAVKDLRHCHNAIQRLHKHEEYKGLAPKSLLQRNCKAPKFPAPPQFNATIAGTAEE
IEAYNNAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGFQFYSESMKLTSPDGEDFCGFVGIGGNNDTVHFQINGTGCK
HVFARRAPWSLHDWLTNVLGVQTLARVDLAYDDYDGIFDCEYARKAWNDNAFRTAERGRNPVLHVDHTIAGFRDGRPDYT
KEQYSIGSRTSRIYWRIYNKALEQKLANTGLVWYRSEVELKKWNIDVLLNPAGAFAAINDFAASISTAKQFNTKPVPTKR
AALDLLASAHWMRRQYGKILNSLIEFHEGDIETVVGSLVRDGTKFTFPDTYGKLVTHILET
>Mature_380_residues
TTATNILKKFDEQSVHIDYLCFTFAVKDLRHCHNAIQRLHKHEEYKGLAPKSLLQRNCKAPKFPAPPQFNATIAGTAEEI
EAYNNAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGFQFYSESMKLTSPDGEDFCGFVGIGGNNDTVHFQINGTGCKH
VFARRAPWSLHDWLTNVLGVQTLARVDLAYDDYDGIFDCEYARKAWNDNAFRTAERGRNPVLHVDHTIAGFRDGRPDYTK
EQYSIGSRTSRIYWRIYNKALEQKLANTGLVWYRSEVELKKWNIDVLLNPAGAFAAINDFAASISTAKQFNTKPVPTKRA
ALDLLASAHWMRRQYGKILNSLIEFHEGDIETVVGSLVRDGTKFTFPDTYGKLVTHILET

Specific function: Unknown

COG id: COG2946

COG function: function code L; Putative phage replication protein RstA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43266; Mature: 43135

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTATNILKKFDEQSVHIDYLCFTFAVKDLRHCHNAIQRLHKHEEYKGLAPKSLLQRNCK
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
APKFPAPPQFNATIAGTAEEIEAYNNAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGF
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCH
QFYSESMKLTSPDGEDFCGFVGIGGNNDTVHFQINGTGCKHVFARRAPWSLHDWLTNVLG
HHHHCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHH
VQTLARVDLAYDDYDGIFDCEYARKAWNDNAFRTAERGRNPVLHVDHTIAGFRDGRPDYT
HHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCEEEECCHHHCCCCCCCCCC
KEQYSIGSRTSRIYWRIYNKALEQKLANTGLVWYRSEVELKKWNIDVLLNPAGAFAAIND
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECEEEEECCCCHHHHHHH
FAASISTAKQFNTKPVPTKRAALDLLASAHWMRRQYGKILNSLIEFHEGDIETVVGSLVR
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
DGTKFTFPDTYGKLVTHILET
CCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TTATNILKKFDEQSVHIDYLCFTFAVKDLRHCHNAIQRLHKHEEYKGLAPKSLLQRNCK
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
APKFPAPPQFNATIAGTAEEIEAYNNAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGF
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCH
QFYSESMKLTSPDGEDFCGFVGIGGNNDTVHFQINGTGCKHVFARRAPWSLHDWLTNVLG
HHHHCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHH
VQTLARVDLAYDDYDGIFDCEYARKAWNDNAFRTAERGRNPVLHVDHTIAGFRDGRPDYT
HHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCEEEECCHHHCCCCCCCCCC
KEQYSIGSRTSRIYWRIYNKALEQKLANTGLVWYRSEVELKKWNIDVLLNPAGAFAAIND
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECEEEEECCCCHHHHHHH
FAASISTAKQFNTKPVPTKRAALDLLASAHWMRRQYGKILNSLIEFHEGDIETVVGSLVR
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
DGTKFTFPDTYGKLVTHILET
CCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA