| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976992
Identifier: 156976992
GI number: 156976992
Start: 965521
End: 965880
Strand: Reverse
Name: 156976992
Synonym: VIBHAR_05777
Alternate gene names: NA
Gene position: 965880-965521 (Counterclockwise)
Preceding gene: 156976993
Following gene: 156976991
Centisome position: 43.82
GC content: 48.06
Gene sequence:
>360_bases ATGGCTAAATCTGTTTTTGTCCTAGGCATGGACATCACTTGGAACTCGGCACGTGGTGACAGTGCTCAACTGAACATCTC ACGTCCACTACGAGAAATTAACTCGGAGAAATTCAAGCGTCGCACCATCGGCGAATCTGGTGACGTAAACCCGCAATGGG ATCAACCTTTGATGATTGATCATGAATACGCCCTGCTCCTTGAGCGCACCGGTGCTTTGGTTCCTCGTCGTGAGTACCAA TTGCAACTTGAAATCAACCCAGAAGATCCATTGGCGGGTGCCATCGTGACAGCGCTTATTCCTGTCGACGCAGAAATTAA GAAGCACTTCGAAGCTTCAATGAAATCAGTTCAAGGTTAG
Upstream 100 bases:
>100_bases CATTGAAACCGTTGTCGGCTCGCTCGTCCGTGATGGAACCAAATTCACCTTCCCCGATACCTACGGCAAGTTGGTGACTC ACATATTGGAGACCTAACAA
Downstream 100 bases:
>100_bases AAAAAATGTCTCTATGCGTCACCGTTGTTAACCAGTACGGCAATTTAAAAGCGACGAAAACTCACGTCGACAATTGCGAA GGCTACGTACTGATTTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAKSVFVLGMDITWNSARGDSAQLNISRPLREINSEKFKRRTIGESGDVNPQWDQPLMIDHEYALLLERTGALVPRREYQ LQLEINPEDPLAGAIVTALIPVDAEIKKHFEASMKSVQG
Sequences:
>Translated_119_residues MAKSVFVLGMDITWNSARGDSAQLNISRPLREINSEKFKRRTIGESGDVNPQWDQPLMIDHEYALLLERTGALVPRREYQ LQLEINPEDPLAGAIVTALIPVDAEIKKHFEASMKSVQG >Mature_118_residues AKSVFVLGMDITWNSARGDSAQLNISRPLREINSEKFKRRTIGESGDVNPQWDQPLMIDHEYALLLERTGALVPRREYQL QLEINPEDPLAGAIVTALIPVDAEIKKHFEASMKSVQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13373; Mature: 13242
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSVFVLGMDITWNSARGDSAQLNISRPLREINSEKFKRRTIGESGDVNPQWDQPLMID CCCCEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC HEYALLLERTGALVPRREYQLQLEINPEDPLAGAIVTALIPVDAEIKKHFEASMKSVQG CHHEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AKSVFVLGMDITWNSARGDSAQLNISRPLREINSEKFKRRTIGESGDVNPQWDQPLMID CCCEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC HEYALLLERTGALVPRREYQLQLEINPEDPLAGAIVTALIPVDAEIKKHFEASMKSVQG CHHEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA