| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976978
Identifier: 156976978
GI number: 156976978
Start: 957092
End: 957802
Strand: Reverse
Name: 156976978
Synonym: VIBHAR_05763
Alternate gene names: NA
Gene position: 957802-957092 (Counterclockwise)
Preceding gene: 156976979
Following gene: 156976976
Centisome position: 43.46
GC content: 41.07
Gene sequence:
>711_bases ATGGCTAAGTTTTTAAACACAAGTGCTACAAACTACTACCTCGAAGAGCTAATCAAAAACTCCTCTGAAAGACTGATTCT CATCAGCCCTTTTCTCAAACTTAATGATCGTATTCGAGAACTTTTAGAAGACAAAGACCGCTTGAAAATCGACATCAGAA TTGTCTATGGTAAGAGCGAGCTTCAACCCGATGAGATTAACTGGCTCAAAGGACTCTCTTTTGTTCGTACAAGCTTTTGC AAGAACCTTCATGCTAAGTGTTACATGAACGAAAGCTCGTGCATTATTACAAGCTTGAATCTGTATGAGTTCAGCCAGGT AAACAACAATGAGATGGGTATTTTCATTGACCGTGATGAAGATGCAGAGATTTACAAAGAGTCTTACGACGAAGCACAGC GTATCATCCGTATAAGTGACGAGGTTAGAATTTCTCTAGAGAAGGTGCAAGCTGAATCAGCTCCTCCCGAAAGAAGTGAG CCAGCTGCTAACGTGCAAGAACAAACGAAGATCACCTCTTCTAAGTTAGCTAAAAAGCACAATCTCAAAACTGACGACTT CCTTAAGCTGTGTGTGACTAAAGGGTACCTATCTTTTGATGATGGAAAACACTCACTAACAGATGAGGGTAAGTCATTTG GTGGCGAGTTCAAATACAGTAAGCGCTTTGGTCCCTACTTCATTTGGCCAGAGTCACTAGAGGTTGTATAG
Upstream 100 bases:
>100_bases GCGTGGCATTTGACCACGCGTTTTTCATTTCAGCTACTTGATCCCATATTGCCTTAGACGTAGCCTATGTGCGCTAGGTT TTATATGTCAAGGATATGAA
Downstream 100 bases:
>100_bases ATTCAAAAAAGGCTCCACTCGGAGCCTTTTTTATTACACCATATTCTTCAACACTCTCGCATACTTCAGTATTTGGTGAG CAATTGCCATATCATTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSELQPDEINWLKGLSFVRTSFC KNLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDEDAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSE PAANVQEQTKITSSKLAKKHNLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV
Sequences:
>Translated_236_residues MAKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSELQPDEINWLKGLSFVRTSFC KNLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDEDAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSE PAANVQEQTKITSSKLAKKHNLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV >Mature_235_residues AKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSELQPDEINWLKGLSFVRTSFCK NLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDEDAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSEP AANVQEQTKITSSKLAKKHNLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27352; Mature: 27221
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSE CCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEEEEEEECCCC LQPDEINWLKGLSFVRTSFCKNLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDE CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCEEHHCCCCCCEEEEEECCC DAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSEPAANVQEQTKITSSKLAKKH CHHHHHHHHHHHHHHEECCHHHEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC NLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV CCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCEEECCCCCCEEECCCCCCCC >Mature Secondary Structure AKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSE CCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEEEEEEECCCC LQPDEINWLKGLSFVRTSFCKNLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDE CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCEEHHCCCCCCEEEEEECCC DAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSEPAANVQEQTKITSSKLAKKH CHHHHHHHHHHHHHHEECCHHHEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC NLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV CCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCEEECCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA