| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976977
Identifier: 156976977
GI number: 156976977
Start: 956693
End: 957058
Strand: Direct
Name: 156976977
Synonym: VIBHAR_05762
Alternate gene names: NA
Gene position: 956693-957058 (Clockwise)
Preceding gene: 156976975
Following gene: 156976980
Centisome position: 43.41
GC content: 42.35
Gene sequence:
>366_bases ATGAAGTATCACGAAATGACAAAAAACTATATTTTTCGTGAATTTGAATGTGGTTTAACCGTTGAAGAAGCTGCTGAACT TTGTTTGAAAAGTGTGAGGACGATCAAACAGTGGGATAAGGGAAAAACCATTCCGCCAGAGTGTAGACGGCTGATGCGCA TGAACAAGGGCAGGGAACTGAGCATCTGCGATGATTGGGAAAACTTCGTAATGAGGCATGATCGCTTAGAGCTTCCAACT GGCCAACGAGTCACGGCTCAACAAGTATTAATTGGTGTAGCATTGTTAGAGTTAGGCGCTTCGAATGATATGGCAATTGC TCACCAAATACTGAAGTATGCGAGAGTGTTGAAGAATATGGTGTAA
Upstream 100 bases:
>100_bases CATTGATTTCGGCGTCTTCTCTTCGCATTATGGGCCCTTATGTTTTATGCAGTTGCATATCACTTATTTATAAAATGTCC CGCTTTTGAGGGACAGTTCA
Downstream 100 bases:
>100_bases TAAAAAAGGCTCCGAGTGGAGCCTTTTTTGAATCTATACAACCTCTAGTGACTCTGGCCAAATGAAGTAGGGACCAAAGC GCTTACTGTATTTGAACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKYHEMTKNYIFREFECGLTVEEAAELCLKSVRTIKQWDKGKTIPPECRRLMRMNKGRELSICDDWENFVMRHDRLELPT GQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNMV
Sequences:
>Translated_121_residues MKYHEMTKNYIFREFECGLTVEEAAELCLKSVRTIKQWDKGKTIPPECRRLMRMNKGRELSICDDWENFVMRHDRLELPT GQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNMV >Mature_121_residues MKYHEMTKNYIFREFECGLTVEEAAELCLKSVRTIKQWDKGKTIPPECRRLMRMNKGRELSICDDWENFVMRHDRLELPT GQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14113; Mature: 14113
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYHEMTKNYIFREFECGLTVEEAAELCLKSVRTIKQWDKGKTIPPECRRLMRMNKGREL CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC SICDDWENFVMRHDRLELPTGQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNM CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC V C >Mature Secondary Structure MKYHEMTKNYIFREFECGLTVEEAAELCLKSVRTIKQWDKGKTIPPECRRLMRMNKGREL CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC SICDDWENFVMRHDRLELPTGQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNM CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA