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The map label for this gene is 156976953

Identifier: 156976953

GI number: 156976953

Start: 941088

End: 942209

Strand: Direct

Name: 156976953

Synonym: VIBHAR_05738

Alternate gene names: NA

Gene position: 941088-942209 (Clockwise)

Preceding gene: 156976952

Following gene: 156976954

Centisome position: 42.7

GC content: 47.68

Gene sequence:

>1122_bases
ATGAAAACACAATACAAAATTCTAGCCACCACGATGACTGCAGCGCTATTCTCAGGCGCTGCTTCTGCTGCCACTTACGC
AATTGAAGCTCGCAGTGATGCAATGGGTGGCGTGGGCACCGTATCTGCCTCTTACCTAACCGCACCATTCTTTAACCCAG
CGCTTACCGCCATTTACCGACGTAATGACGACGCAGGTATGATTGTGCCAAGCTTCGGTATCAACTATAACGACCAAAAC
GGTTTAATCGATGAGATTGAGCGAATAGGCAAACTCACGGACCCAACCGAGATCGTAAACTCATTAAATGCCATTGATGG
CCAGAAAATGGACTTCGATTTAGGCGGTGTGGTTGCAGTTGGTATCCCAAACAAGTTCTTGTCTGCGACCGCTTACGGCA
AACTGTATACCGAATCTTTCGTAGAGCCGACCATCGATACTGTAAGCGGCGACCCGTTAAATGACAGTTACGTGCGCGGT
GTCTCCATTGGCGTAGCGGAAGCGGGTATTTCACTGGCGAAGTACACCAACTTCATGAACCAGCACCTGTCATTTGGTAT
CACACCAAAACTGCAACGCATCTACACCTATACATACGCGACCAGCTTTGCCGCATTTGACACTAAAGACCTGCGTGAAA
ATGAAACCGCAGAAACCATGTTCAACTTAGATGCTGGCGCACTTTGGTTCTTTGGACCATATCGCTTGGGTATCTCTGCC
AAGAACTTGATTGGCCGCGACGTGAAAACCAAATCGTTCACATACAACGGCGACACGATCCAATCCTATGAGTACAGCAT
GCGACCAGTTTACACCGTTGGTGCGGGTTACGTAGCCGATTACTTTAGCTTTAGTGTCGATTACGATTTAAACGAAGAGA
AGAAGTTCTCTACATTTGATGACAACACACAAATGCTACGCGCCGGTTTTGAGATTGATGTCCTTCGCCAGCTTGCACTT
CGTGGCGGTTATATGACAAACCTAGCTCGTTCAGATGACGAGGGGACGATCACTGCCGGTCTTGGCTTATCGCCACTTAA
CTTAATTGAAATAGACATTGCTGCCCGATACACCAACGCAGATGCAATGGGCGCTTCAATTAATTTCCTTGCGACCTATT
AA

Upstream 100 bases:

>100_bases
AAACTATTAGCCGAACTTATGATGTTTCTCTCGAAGAATAGCTAAAGAAATGACACTTGTGCCGATATAAGTTCAGGAAG
AACGAAAACACAAGTGTAGT

Downstream 100 bases:

>100_bases
GCGAATCGTTATAGTCAGCTCCTCACATTGAGGAGCTTTTTTATGTTTGACGATTTACCACCTCTGTCCCATCAAGAACA
GCAACAAGCTGTAGAACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Plasmid Transfer Protein TraF; TraF Protein; Outer Membrane Or Exported; Conjugative Transfer Protein; TraF-Related Protein; IncI1 Plasmid Conjugative Transfer Protein TraF

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKTQYKILATTMTAALFSGAASAATYAIEARSDAMGGVGTVSASYLTAPFFNPALTAIYRRNDDAGMIVPSFGINYNDQN
GLIDEIERIGKLTDPTEIVNSLNAIDGQKMDFDLGGVVAVGIPNKFLSATAYGKLYTESFVEPTIDTVSGDPLNDSYVRG
VSIGVAEAGISLAKYTNFMNQHLSFGITPKLQRIYTYTYATSFAAFDTKDLRENETAETMFNLDAGALWFFGPYRLGISA
KNLIGRDVKTKSFTYNGDTIQSYEYSMRPVYTVGAGYVADYFSFSVDYDLNEEKKFSTFDDNTQMLRAGFEIDVLRQLAL
RGGYMTNLARSDDEGTITAGLGLSPLNLIEIDIAARYTNADAMGASINFLATY

Sequences:

>Translated_373_residues
MKTQYKILATTMTAALFSGAASAATYAIEARSDAMGGVGTVSASYLTAPFFNPALTAIYRRNDDAGMIVPSFGINYNDQN
GLIDEIERIGKLTDPTEIVNSLNAIDGQKMDFDLGGVVAVGIPNKFLSATAYGKLYTESFVEPTIDTVSGDPLNDSYVRG
VSIGVAEAGISLAKYTNFMNQHLSFGITPKLQRIYTYTYATSFAAFDTKDLRENETAETMFNLDAGALWFFGPYRLGISA
KNLIGRDVKTKSFTYNGDTIQSYEYSMRPVYTVGAGYVADYFSFSVDYDLNEEKKFSTFDDNTQMLRAGFEIDVLRQLAL
RGGYMTNLARSDDEGTITAGLGLSPLNLIEIDIAARYTNADAMGASINFLATY
>Mature_373_residues
MKTQYKILATTMTAALFSGAASAATYAIEARSDAMGGVGTVSASYLTAPFFNPALTAIYRRNDDAGMIVPSFGINYNDQN
GLIDEIERIGKLTDPTEIVNSLNAIDGQKMDFDLGGVVAVGIPNKFLSATAYGKLYTESFVEPTIDTVSGDPLNDSYVRG
VSIGVAEAGISLAKYTNFMNQHLSFGITPKLQRIYTYTYATSFAAFDTKDLRENETAETMFNLDAGALWFFGPYRLGISA
KNLIGRDVKTKSFTYNGDTIQSYEYSMRPVYTVGAGYVADYFSFSVDYDLNEEKKFSTFDDNTQMLRAGFEIDVLRQLAL
RGGYMTNLARSDDEGTITAGLGLSPLNLIEIDIAARYTNADAMGASINFLATY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40690; Mature: 40690

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQYKILATTMTAALFSGAASAATYAIEARSDAMGGVGTVSASYLTAPFFNPALTAIYR
CCCCEEEHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCCCHHHEECCCCCHHEEEEEE
RNDDAGMIVPSFGINYNDQNGLIDEIERIGKLTDPTEIVNSLNAIDGQKMDFDLGGVVAV
ECCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCEEEE
GIPNKFLSATAYGKLYTESFVEPTIDTVSGDPLNDSYVRGVSIGVAEAGISLAKYTNFMN
ECCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHCEEEEEHHHHCHHHHHHHHHHH
QHLSFGITPKLQRIYTYTYATSFAAFDTKDLRENETAETMFNLDAGALWFFGPYRLGISA
HHHCCCCCCCHHHEEEEEHHHEEEECCCHHHCCCCCHHHEEECCCCEEEEECCEEECCCH
KNLIGRDVKTKSFTYNGDTIQSYEYSMRPVYTVGAGYVADYFSFSVDYDLNEEKKFSTFD
HHHHCCCCCCCEEEECCCCEECCCCCCCEEEEECCCHHHHHHEEEEECCCCCCCCCCCCC
DNTQMLRAGFEIDVLRQLALRGGYMTNLARSDDEGTITAGLGLSPLNLIEIDIAARYTNA
CCHHHHHCCCCHHHHHHHHHCCCHHECCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCC
DAMGASINFLATY
CCCCCEEEEEEEC
>Mature Secondary Structure
MKTQYKILATTMTAALFSGAASAATYAIEARSDAMGGVGTVSASYLTAPFFNPALTAIYR
CCCCEEEHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCCCHHHEECCCCCHHEEEEEE
RNDDAGMIVPSFGINYNDQNGLIDEIERIGKLTDPTEIVNSLNAIDGQKMDFDLGGVVAV
ECCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCEEEE
GIPNKFLSATAYGKLYTESFVEPTIDTVSGDPLNDSYVRGVSIGVAEAGISLAKYTNFMN
ECCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHCEEEEEHHHHCHHHHHHHHHHH
QHLSFGITPKLQRIYTYTYATSFAAFDTKDLRENETAETMFNLDAGALWFFGPYRLGISA
HHHCCCCCCCHHHEEEEEHHHEEEECCCHHHCCCCCHHHEEECCCCEEEEECCEEECCCH
KNLIGRDVKTKSFTYNGDTIQSYEYSMRPVYTVGAGYVADYFSFSVDYDLNEEKKFSTFD
HHHHCCCCCCCEEEECCCCEECCCCCCCEEEEECCCHHHHHHEEEEECCCCCCCCCCCCC
DNTQMLRAGFEIDVLRQLALRGGYMTNLARSDDEGTITAGLGLSPLNLIEIDIAARYTNA
CCHHHHHCCCCHHHHHHHHHCCCHHECCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCC
DAMGASINFLATY
CCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA