Click here to switch to the map view.

The map label for this gene is 156976925

Identifier: 156976925

GI number: 156976925

Start: 913219

End: 913659

Strand: Direct

Name: 156976925

Synonym: VIBHAR_05710

Alternate gene names: NA

Gene position: 913219-913659 (Clockwise)

Preceding gene: 156976924

Following gene: 156976928

Centisome position: 41.43

GC content: 44.67

Gene sequence:

>441_bases
ATGAAAACTCACGTAATGAAAAGTATTAAACAAATTTCCATTGTCGCATTTTCTGGTGCGCTTTTTGGCATTGGTATGGT
GATTTCCGGTATGGCTGATCCGGCAAAAGTGATTGGCTTCCTAGATATTACCGGAGAATGGGATCCAAGCTTAGCCTTCG
TTATGGGGGGAGCACTTGCGGTGTTCGGTCCTGCTTATCTGTTATTAATAAAGCCAAGAAGTGAATCTGTGTTTGGTAAT
GAGATTATTTGTCCAACTTCTAAAGCGATAGACAAAAGGTTAGTTGGCGGTGCGGCAATGTTTGGTATTGGTTGGGGCTT
ACTTGGCGTGTGTCCTGGTCCTGCGGTTGCCAGCCTCTTTACTGGCAACACACAAGTTCTGCTCTTTATAGCGGCAATGT
TGGTTGGGTCATTCACCGCTAAAACAATTGTTCGCGGCTAA

Upstream 100 bases:

>100_bases
GGATGGGGCGTTTCTCTGTCCGTTCCGTCGTTGCGACGTGTACTTTTATGGCCACAGCCATGTTAACCGTCTTACTGGTA
TCGTGAGGAATAGGGTCGTT

Downstream 100 bases:

>100_bases
AGAGTTCTTCAACGCAAAAAGAGTACTTCAATTCTAAAAAGTGAGTGTCGTAGAAACCGGACAATGATCACTCAGTTTGT
AGTCGAGCACATCTTGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKTHVMKSIKQISIVAFSGALFGIGMVISGMADPAKVIGFLDITGEWDPSLAFVMGGALAVFGPAYLLLIKPRSESVFGN
EIICPTSKAIDKRLVGGAAMFGIGWGLLGVCPGPAVASLFTGNTQVLLFIAAMLVGSFTAKTIVRG

Sequences:

>Translated_146_residues
MKTHVMKSIKQISIVAFSGALFGIGMVISGMADPAKVIGFLDITGEWDPSLAFVMGGALAVFGPAYLLLIKPRSESVFGN
EIICPTSKAIDKRLVGGAAMFGIGWGLLGVCPGPAVASLFTGNTQVLLFIAAMLVGSFTAKTIVRG
>Mature_146_residues
MKTHVMKSIKQISIVAFSGALFGIGMVISGMADPAKVIGFLDITGEWDPSLAFVMGGALAVFGPAYLLLIKPRSESVFGN
EIICPTSKAIDKRLVGGAAMFGIGWGLLGVCPGPAVASLFTGNTQVLLFIAAMLVGSFTAKTIVRG

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 15107; Mature: 15107

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTHVMKSIKQISIVAFSGALFGIGMVISGMADPAKVIGFLDITGEWDPSLAFVMGGALA
CCCHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCHHHHHHHHHH
VFGPAYLLLIKPRSESVFGNEIICPTSKAIDKRLVGGAAMFGIGWGLLGVCPGPAVASLF
HHCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH
TGNTQVLLFIAAMLVGSFTAKTIVRG
CCCHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MKTHVMKSIKQISIVAFSGALFGIGMVISGMADPAKVIGFLDITGEWDPSLAFVMGGALA
CCCHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCHHHHHHHHHH
VFGPAYLLLIKPRSESVFGNEIICPTSKAIDKRLVGGAAMFGIGWGLLGVCPGPAVASLF
HHCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH
TGNTQVLLFIAAMLVGSFTAKTIVRG
CCCHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]