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The map label for this gene is ygbA [H]

Identifier: 156976910

GI number: 156976910

Start: 897977

End: 898363

Strand: Direct

Name: ygbA [H]

Synonym: VIBHAR_05694

Alternate gene names: 156976910

Gene position: 897977-898363 (Clockwise)

Preceding gene: 156976909

Following gene: 156976913

Centisome position: 40.74

GC content: 45.22

Gene sequence:

>387_bases
ATGAGCGACATTTTATTAGGCAAACTCGCCACAGAATTTAAAACCGTCAAGGCGATGGTAGAGGTCTATTGTAAAGATCA
CCATGGCACGAGAGGCGAGTTATGCTCAGAATGTCGCGAATTGTTAGAGTATGCGGAAGTACGGCTTGATCGTTGTCCTT
ACGGAGAAGACAAGCCGACTTGCAACAAATGTCCGATTCACTGTTACAAGCCAGAGCCTAAAGAACAAATGCGCTTAGTG
ATGCGTTATTCAGGGCCGAGAATGTTGCTTAAACACCCAATTTTAGCAATTCGACACTTGTTGCATGAGAAACGCGAGGT
GCCTGAAAAACCAGCTGCCAACGCATCTAATCGCCATAAACGAATGGAAAACCAAAAACGAGGGTGA

Upstream 100 bases:

>100_bases
CGATAATGGTCGGACTCTGCAACTGTACACCATGAAGTTGTAACCAGATAAGCTTCGATTAAGATGCAGCAATCAACGGC
GCGTTAGCTTGAGGAAAAGA

Downstream 100 bases:

>100_bases
TATACCGAATCAACTTGAAGATGCAGGCTTGAGAACCTGAAAATTATCATTAATTCGAGATGCCAAAGAGCCTGCGATCT
CTGGAAGAGTCACAGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSDILLGKLATEFKTVKAMVEVYCKDHHGTRGELCSECRELLEYAEVRLDRCPYGEDKPTCNKCPIHCYKPEPKEQMRLV
MRYSGPRMLLKHPILAIRHLLHEKREVPEKPAANASNRHKRMENQKRG

Sequences:

>Translated_128_residues
MSDILLGKLATEFKTVKAMVEVYCKDHHGTRGELCSECRELLEYAEVRLDRCPYGEDKPTCNKCPIHCYKPEPKEQMRLV
MRYSGPRMLLKHPILAIRHLLHEKREVPEKPAANASNRHKRMENQKRG
>Mature_127_residues
SDILLGKLATEFKTVKAMVEVYCKDHHGTRGELCSECRELLEYAEVRLDRCPYGEDKPTCNKCPIHCYKPEPKEQMRLVM
RYSGPRMLLKHPILAIRHLLHEKREVPEKPAANASNRHKRMENQKRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=104, Percent_Identity=44.2307692307692, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 14957; Mature: 14826

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDILLGKLATEFKTVKAMVEVYCKDHHGTRGELCSECRELLEYAEVRLDRCPYGEDKPT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
CNKCPIHCYKPEPKEQMRLVMRYSGPRMLLKHPILAIRHLLHEKREVPEKPAANASNRHK
CCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
RMENQKRG
HHHHCCCC
>Mature Secondary Structure 
SDILLGKLATEFKTVKAMVEVYCKDHHGTRGELCSECRELLEYAEVRLDRCPYGEDKPT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
CNKCPIHCYKPEPKEQMRLVMRYSGPRMLLKHPILAIRHLLHEKREVPEKPAANASNRHK
CCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
RMENQKRG
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]