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The map label for this gene is mcp4 [H]

Identifier: 156976907

GI number: 156976907

Start: 895486

End: 897102

Strand: Direct

Name: mcp4 [H]

Synonym: VIBHAR_05691

Alternate gene names: 156976907

Gene position: 895486-897102 (Clockwise)

Preceding gene: 156976905

Following gene: 156976909

Centisome position: 40.63

GC content: 47.06

Gene sequence:

>1617_bases
ATGAAACTTAGTAACCTATCCGTTAGAAACAAGCTGCTTGCGCTTGTTATTTTCTCTGCATTCCTTCTGATTGCGGCTTG
CTTATACAACTTAAATGAACAACGTAAAAACTCGTTAAGCGAACGAGAGAGCAAACTCAGTGCGCTAGTTGAAGTTGCCA
TTAGCTTGATTGACCATTACTACCAGCAGCGAAGTGAGTTGGGGGTTGAGGATGCAAAACAACAAGCGCTGAATGCGATC
CAAACATTGCGCTATGACAGCAACAACTACTTCTGGGTACTGACGCCTGAACTCAAAGTCTTGCTTCATCCGACTAAGCC
TGATCTCAACGGTGCGGATGCGAGCAACTTTAAAGATGGTGCAGGTAAGTTCCACTGGCGTGAAATGGCTCAGATAGCCA
AAACTACGCGCTCAGGCTTTTTGGATTACCACTGGAAAAGCCCAGAAGGGAAATTGAAAGATAAGATCTCCTACGTACAA
ATCTACCCTGAGTGGCAATGGATCGTTGGTTCAGGCATCCTTGTTGCCGATATTCAAGAAGCCTTTTACAAAGAAGCGGT
CAAAGAGGCAATCATCGCTACGGTATTAATTGGTGCGCTAGCGGTTCTCGGTTACATCATTTCAAGTAACATCATCGATC
CTCTTCAAAGACTGATCAGCAACACCCACAAAATTGCCGATGGTGATCTCACTGTGCGCCTAAATGCATCTCGTAAAGAT
GAGCTGGGTGAGATGAGTAACGAGATTGACCGTATGCTAGAAAAGCTACAAGGGACTTTACTCGCGGCCCATGAATCTGC
GCAGCAGTCTGCCAATATGGCACAAAGCATTGCACAAGCAAGTGAAGAGGCTGCGACCAGTGTAAACAGTCAGCATGCAC
AATTAGAGCAACTTTCAACAGCAATGACGGAAATGAGTACCACTATTTCAGATGTCGCCAACAATGCAGAGAATACAGCG
CACAGCACGGCACTTGTAACCAATCATGCCGAGCAAAGCGGGAAAGACATGCAGCAAACCTCTCAAACCATTGCTGAAGT
CTCTCAAGACATCGCTGCTGCGGACCAGATGGTCGCAGAGCTTCAAGCGGGTGTGAATGAAATCCGAGCGGTTGTGAGTG
TGATTCGAGAAGTTTCTGAGCAAACAAACTTGCTTGCTTTAAATGCAGCGATTGAAGCAGCACGGGCAGGTGAGCAGGGC
CGTGGATTTGCCGTTGTTGCCGATGAGGTACGAAACCTTGCGAGTCGCACACAACAATCGACCGACGAAGTTCAACAGAC
CATCGATTCACTGATTGAGCGTACGGAGCGTACCGTCAAAGCGATGGAGCGCAGCAATGCAAAAGTGGAGCAGAGTGTCG
GAATATCACAATCTACGCAAACGCAATTAGAAACCATGGTTGAGGAGTTGATACGTTCGAATGATATGGTGGCTCAGATT
GCCGCAGCGTCAGAGCAGCAAGGCTTAGTGGCGAACGAGATGACACAAAATGTTACGACCATTCACCTAGCGGCAAATGA
AGTGAAAGAAGCGTCGCAAATGCTTGCAGAGGAAAGCCAGCACTTAGCGGCAACCTCAGAGATTCTTCATGATCAACTTA
GATACTTTAAAGTCTAA

Upstream 100 bases:

>100_bases
ATAACAAATATTAAAAAAATTGATATGCATCAGGATAAGTATCTGGTTGTTTTATAGATTTTGCTTTCCAGTTGGAAAAC
ACAATAAAAATGGCTTAATT

Downstream 100 bases:

>100_bases
TTTTTAAGTACAAGTAAAAGAAAAGCCGCGTTATGCGGCTTTTCTTTTATGCTTCATCTGTTGCCTGAGTCTCTTCAGCT
ACTTGTGAAGTTTGCTCATT

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MKLSNLSVRNKLLALVIFSAFLLIAACLYNLNEQRKNSLSERESKLSALVEVAISLIDHYYQQRSELGVEDAKQQALNAI
QTLRYDSNNYFWVLTPELKVLLHPTKPDLNGADASNFKDGAGKFHWREMAQIAKTTRSGFLDYHWKSPEGKLKDKISYVQ
IYPEWQWIVGSGILVADIQEAFYKEAVKEAIIATVLIGALAVLGYIISSNIIDPLQRLISNTHKIADGDLTVRLNASRKD
ELGEMSNEIDRMLEKLQGTLLAAHESAQQSANMAQSIAQASEEAATSVNSQHAQLEQLSTAMTEMSTTISDVANNAENTA
HSTALVTNHAEQSGKDMQQTSQTIAEVSQDIAAADQMVAELQAGVNEIRAVVSVIREVSEQTNLLALNAAIEAARAGEQG
RGFAVVADEVRNLASRTQQSTDEVQQTIDSLIERTERTVKAMERSNAKVEQSVGISQSTQTQLETMVEELIRSNDMVAQI
AAASEQQGLVANEMTQNVTTIHLAANEVKEASQMLAEESQHLAATSEILHDQLRYFKV

Sequences:

>Translated_538_residues
MKLSNLSVRNKLLALVIFSAFLLIAACLYNLNEQRKNSLSERESKLSALVEVAISLIDHYYQQRSELGVEDAKQQALNAI
QTLRYDSNNYFWVLTPELKVLLHPTKPDLNGADASNFKDGAGKFHWREMAQIAKTTRSGFLDYHWKSPEGKLKDKISYVQ
IYPEWQWIVGSGILVADIQEAFYKEAVKEAIIATVLIGALAVLGYIISSNIIDPLQRLISNTHKIADGDLTVRLNASRKD
ELGEMSNEIDRMLEKLQGTLLAAHESAQQSANMAQSIAQASEEAATSVNSQHAQLEQLSTAMTEMSTTISDVANNAENTA
HSTALVTNHAEQSGKDMQQTSQTIAEVSQDIAAADQMVAELQAGVNEIRAVVSVIREVSEQTNLLALNAAIEAARAGEQG
RGFAVVADEVRNLASRTQQSTDEVQQTIDSLIERTERTVKAMERSNAKVEQSVGISQSTQTQLETMVEELIRSNDMVAQI
AAASEQQGLVANEMTQNVTTIHLAANEVKEASQMLAEESQHLAATSEILHDQLRYFKV
>Mature_538_residues
MKLSNLSVRNKLLALVIFSAFLLIAACLYNLNEQRKNSLSERESKLSALVEVAISLIDHYYQQRSELGVEDAKQQALNAI
QTLRYDSNNYFWVLTPELKVLLHPTKPDLNGADASNFKDGAGKFHWREMAQIAKTTRSGFLDYHWKSPEGKLKDKISYVQ
IYPEWQWIVGSGILVADIQEAFYKEAVKEAIIATVLIGALAVLGYIISSNIIDPLQRLISNTHKIADGDLTVRLNASRKD
ELGEMSNEIDRMLEKLQGTLLAAHESAQQSANMAQSIAQASEEAATSVNSQHAQLEQLSTAMTEMSTTISDVANNAENTA
HSTALVTNHAEQSGKDMQQTSQTIAEVSQDIAAADQMVAELQAGVNEIRAVVSVIREVSEQTNLLALNAAIEAARAGEQG
RGFAVVADEVRNLASRTQQSTDEVQQTIDSLIERTERTVKAMERSNAKVEQSVGISQSTQTQLETMVEELIRSNDMVAQI
AAASEQQGLVANEMTQNVTTIHLAANEVKEASQMLAEESQHLAATSEILHDQLRYFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=418, Percent_Identity=27.9904306220096, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1788195, Length=309, Percent_Identity=28.8025889967638, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1788194, Length=348, Percent_Identity=30.7471264367816, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1787690, Length=324, Percent_Identity=29.320987654321, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1789453, Length=339, Percent_Identity=27.1386430678466, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59212; Mature: 59212

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSNLSVRNKLLALVIFSAFLLIAACLYNLNEQRKNSLSERESKLSALVEVAISLIDHY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQQRSELGVEDAKQQALNAIQTLRYDSNNYFWVLTPELKVLLHPTKPDLNGADASNFKDG
HHHHHHCCHHHHHHHHHHHHHHHEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCC
AGKFHWREMAQIAKTTRSGFLDYHWKSPEGKLKDKISYVQIYPEWQWIVGSGILVADIQE
CCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCEEEEECCCEEEEECCCCHHHHHHH
AFYKEAVKEAIIATVLIGALAVLGYIISSNIIDPLQRLISNTHKIADGDLTVRLNASRKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCHH
ELGEMSNEIDRMLEKLQGTLLAAHESAQQSANMAQSIAQASEEAATSVNSQHAQLEQLST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTEMSTTISDVANNAENTAHSTALVTNHAEQSGKDMQQTSQTIAEVSQDIAAADQMVAE
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAGVNEIRAVVSVIREVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQQS
HHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCC
TDEVQQTIDSLIERTERTVKAMERSNAKVEQSVGISQSTQTQLETMVEELIRSNDMVAQI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHH
AAASEQQGLVANEMTQNVTTIHLAANEVKEASQMLAEESQHLAATSEILHDQLRYFKV
HHHHHHCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLSNLSVRNKLLALVIFSAFLLIAACLYNLNEQRKNSLSERESKLSALVEVAISLIDHY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQQRSELGVEDAKQQALNAIQTLRYDSNNYFWVLTPELKVLLHPTKPDLNGADASNFKDG
HHHHHHCCHHHHHHHHHHHHHHHEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCC
AGKFHWREMAQIAKTTRSGFLDYHWKSPEGKLKDKISYVQIYPEWQWIVGSGILVADIQE
CCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCEEEEECCCEEEEECCCCHHHHHHH
AFYKEAVKEAIIATVLIGALAVLGYIISSNIIDPLQRLISNTHKIADGDLTVRLNASRKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCHH
ELGEMSNEIDRMLEKLQGTLLAAHESAQQSANMAQSIAQASEEAATSVNSQHAQLEQLST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTEMSTTISDVANNAENTAHSTALVTNHAEQSGKDMQQTSQTIAEVSQDIAAADQMVAE
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAGVNEIRAVVSVIREVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQQS
HHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCC
TDEVQQTIDSLIERTERTVKAMERSNAKVEQSVGISQSTQTQLETMVEELIRSNDMVAQI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHH
AAASEQQGLVANEMTQNVTTIHLAANEVKEASQMLAEESQHLAATSEILHDQLRYFKV
HHHHHHCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]