| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976886
Identifier: 156976886
GI number: 156976886
Start: 872771
End: 873199
Strand: Direct
Name: 156976886
Synonym: VIBHAR_05662
Alternate gene names: NA
Gene position: 872771-873199 (Clockwise)
Preceding gene: 156976885
Following gene: 156976887
Centisome position: 39.6
GC content: 44.52
Gene sequence:
>429_bases ATGCAAATATCTAGTTGGATTCAGCTTTGCTTACGTGAGCTTGAAGGTACGCCCATAAAAGAACATTCCGATATCGACGC GTCTTTTGCGGAGTCTGAACGTTTCTCAAAATGGAAGGCAAGCAAAAGAGAAGTACGCTTGGAAGAAGTCAGTGATCGTT GCTGGATCAAGAGCTGCACAGGTGGCTACATCACAGAGGTGCACTTACATGCGGATGGTTCACTCGATGAATACACCTTG TTTGGACGCCTTCATACCAAAGGGCATTGGGAGCTAGAGGCTGGCGTACTTCATATCACGATCTACAAAGGCGAAAACAC TTATGAACTTTCTGTTGTAGGAAACCGTGAACCTTCCATCCACTCTGCGATTGAATACAAAAATGGAGAAGTGCACTCCT ATCTAAAACTGACTCCAATTTCTCAATAG
Upstream 100 bases:
>100_bases TCGATGTCAGGTGCGGCATCATTAGTTGATATCGATATACCAGTATTAAGCAGCCCACGTTTAGGCGTAAAAAGGGCGAT TGAAACCTTAAGGACATTCC
Downstream 100 bases:
>100_bases CAATTTAACAAGGACGAGTACCACAATATGGATATTGTATTTGTAAGGCATGGCGTGCCAGATTTTACGTTAGCGGATGA GCGGCAGATGACTCAACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MQISSWIQLCLRELEGTPIKEHSDIDASFAESERFSKWKASKREVRLEEVSDRCWIKSCTGGYITEVHLHADGSLDEYTL FGRLHTKGHWELEAGVLHITIYKGENTYELSVVGNREPSIHSAIEYKNGEVHSYLKLTPISQ
Sequences:
>Translated_142_residues MQISSWIQLCLRELEGTPIKEHSDIDASFAESERFSKWKASKREVRLEEVSDRCWIKSCTGGYITEVHLHADGSLDEYTL FGRLHTKGHWELEAGVLHITIYKGENTYELSVVGNREPSIHSAIEYKNGEVHSYLKLTPISQ >Mature_142_residues MQISSWIQLCLRELEGTPIKEHSDIDASFAESERFSKWKASKREVRLEEVSDRCWIKSCTGGYITEVHLHADGSLDEYTL FGRLHTKGHWELEAGVLHITIYKGENTYELSVVGNREPSIHSAIEYKNGEVHSYLKLTPISQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16278; Mature: 16278
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISSWIQLCLRELEGTPIKEHSDIDASFAESERFSKWKASKREVRLEEVSDRCWIKSCT CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHEEHHHHCCCEEEEECC GGYITEVHLHADGSLDEYTLFGRLHTKGHWELEAGVLHITIYKGENTYELSVVGNREPSI CCEEEEEEEECCCCCCEEEEEEEEECCCCEEEECCEEEEEEEECCCEEEEEEEECCCCCC HSAIEYKNGEVHSYLKLTPISQ HHEEEECCCCEEEEEEEEECCC >Mature Secondary Structure MQISSWIQLCLRELEGTPIKEHSDIDASFAESERFSKWKASKREVRLEEVSDRCWIKSCT CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHEEHHHHCCCEEEEECC GGYITEVHLHADGSLDEYTLFGRLHTKGHWELEAGVLHITIYKGENTYELSVVGNREPSI CCEEEEEEEECCCCCCEEEEEEEEECCCCEEEECCEEEEEEEECCCEEEEEEEECCCCCC HSAIEYKNGEVHSYLKLTPISQ HHEEEECCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA