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The map label for this gene is chiD [H]

Identifier: 156976880

GI number: 156976880

Start: 865704

End: 867401

Strand: Direct

Name: chiD [H]

Synonym: VIBHAR_05656

Alternate gene names: 156976880

Gene position: 865704-867401 (Clockwise)

Preceding gene: 156976878

Following gene: 156976884

Centisome position: 39.28

GC content: 45.76

Gene sequence:

>1698_bases
ATGAGAGGTAACACGATGAAGCAAAAAGCGCTATATCGAGCAGTAGCAATGGGTTTGAGTGGTCTTGCGAACGTCGCATC
CGCTAATGAGATGGTAAATCCTGATGGTGGTGTCGTAGTGGGTTACTGGCATAACTGGTGCGATGGCGCTGGTTACAAGG
GAGGTAATGCACCGTGTGTAACATTGGATGAAGTTGATCCTATGTACAATGTGGTTAACGTCTCCTTTATGAAGGTATTC
AATACCAGTGAAGGTCGTATTCCAACCTTTAAGCTCGATCCAAATATCGGCCTTTCAGAACAACAATTTATTGACCAAAT
TGAAGCTCTAAACCAACAAGGACGTGCCGTTCTCATCGCTCTTGGTGGCGCAGATGCTCACGTTGAACTTAGAACTGGTG
ACGAACAAGCGTTCGCACAAGAGATTATTCGTTTAACGGATAAGTTCGGTTTTGATGGTCTAGATATCGATTTAGAGCAG
TCAGCAGTAACGGCAGAGAACAACCAAACCGTAATTCCAGCTGCACTTCGCCTTGTAAAAGAGCATTATCAACAACAAGG
TAAGAACTTCCTAATTACGATGGCGCCTGAATTCCCTTATCTAACAGAAGGTGGCAAGTATGTTCCTTACATTACTGGTT
TAGAAGGGTACTACGATTGGATCAACCCTCAGTTTTACAATCAAGGTGGTGACGGTATTTGGGTTGATGGCGTGGGTTGG
ATAGCGCAAAACAATGATGAGTTAAAACAAGAGTTTATTTACTACATTTCGGACGCTCTATCGAACGGTACACGCGGTTT
CCACAAAATCCCGCATGACAAACTGGTGTTTGGTATCCCATCTAACATTGATGCTGCTGCAACGGGCTTTGTTCAAAACC
CTCAAGACCTTTACGACGCGTTTGATCAACTTAAAGCGCAAGGGCAGGCACTTCGTGGCGTAATGACATGGTCGGTGAAC
TGGGATATGGGCACCGATAAAAATGGCCAAGCGTACGGTGAAAAATTCGTGAAGGATTACGGTCCGTTTATCCACGGGCA
GACTCCACCACCAAGTGAAGGTGAACCAGTTTTTAGTGGCCTCAACGATGTTCGTGTGCATCACGGTAGTTCATTTGACC
CGTATGCAGGTGTTACTGCGTCTGATAAAGAAGATGGAGACCTAACCAACAGCATCACTGTCGAAGGTTCAGTTGATGTG
AACACGGTAGGCACATATGTTTTGGTTTACAGTGTAAAAGACAGCGACAACAATGAAACCAAGCAAAGTAGAACGGTTGT
TGTTTACAGCCTAGTGCCTGAGTTTGAAGGTGTCGCAGATACGACCATCCAGCTTGGTGACGCTTTTGACCCAATGGCAG
GCGTAAAAGCGACGGATGCAGAAGACGGTGATTTGACTGATCAAGTGCGTGTAGAAGGCAGCGTAGATGTGAACGTACTA
GGTGTCTACGACTTGGTTTACCGCGTAACGGACAGTGCTAATCAAACTACGACTGCACAACGCTCTGTGATTGTTTCTGA
TGGCAGCAGTTACCCTCCGTATGAATCTGGAAAAACGTATGAAGCAGGTGACATTGTCACAGGTTCAGATGGCAACTTGT
ATCAATGTAAACCATGGCCATACACGGGCTGGTGTTCAAACCCTTCTTATGCGCCAGGTGAAACCGTTTACTGGTCAGAC
GCTTGGGATAAGTTGTAA

Upstream 100 bases:

>100_bases
GTAAGTGTATCTGTTTTCTTAGCTCGGCCATATAATCCAAACGAAATTCATTAAGTGCCAATATAAAGTACTGAATGATT
GTTGTGATGAAACAAAATGG

Downstream 100 bases:

>100_bases
TTAGCCCATTAGTTGTTGCAAGCCTCCTTAATTGGCTGTCTCTTGATCACAAGACTAGTGATCAAGAGACATTGCGAGTT
CGTAGCCCTCAAGGATGGTT

Product: chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MRGNTMKQKALYRAVAMGLSGLANVASANEMVNPDGGVVVGYWHNWCDGAGYKGGNAPCVTLDEVDPMYNVVNVSFMKVF
NTSEGRIPTFKLDPNIGLSEQQFIDQIEALNQQGRAVLIALGGADAHVELRTGDEQAFAQEIIRLTDKFGFDGLDIDLEQ
SAVTAENNQTVIPAALRLVKEHYQQQGKNFLITMAPEFPYLTEGGKYVPYITGLEGYYDWINPQFYNQGGDGIWVDGVGW
IAQNNDELKQEFIYYISDALSNGTRGFHKIPHDKLVFGIPSNIDAAATGFVQNPQDLYDAFDQLKAQGQALRGVMTWSVN
WDMGTDKNGQAYGEKFVKDYGPFIHGQTPPPSEGEPVFSGLNDVRVHHGSSFDPYAGVTASDKEDGDLTNSITVEGSVDV
NTVGTYVLVYSVKDSDNNETKQSRTVVVYSLVPEFEGVADTTIQLGDAFDPMAGVKATDAEDGDLTDQVRVEGSVDVNVL
GVYDLVYRVTDSANQTTTAQRSVIVSDGSSYPPYESGKTYEAGDIVTGSDGNLYQCKPWPYTGWCSNPSYAPGETVYWSD
AWDKL

Sequences:

>Translated_565_residues
MRGNTMKQKALYRAVAMGLSGLANVASANEMVNPDGGVVVGYWHNWCDGAGYKGGNAPCVTLDEVDPMYNVVNVSFMKVF
NTSEGRIPTFKLDPNIGLSEQQFIDQIEALNQQGRAVLIALGGADAHVELRTGDEQAFAQEIIRLTDKFGFDGLDIDLEQ
SAVTAENNQTVIPAALRLVKEHYQQQGKNFLITMAPEFPYLTEGGKYVPYITGLEGYYDWINPQFYNQGGDGIWVDGVGW
IAQNNDELKQEFIYYISDALSNGTRGFHKIPHDKLVFGIPSNIDAAATGFVQNPQDLYDAFDQLKAQGQALRGVMTWSVN
WDMGTDKNGQAYGEKFVKDYGPFIHGQTPPPSEGEPVFSGLNDVRVHHGSSFDPYAGVTASDKEDGDLTNSITVEGSVDV
NTVGTYVLVYSVKDSDNNETKQSRTVVVYSLVPEFEGVADTTIQLGDAFDPMAGVKATDAEDGDLTDQVRVEGSVDVNVL
GVYDLVYRVTDSANQTTTAQRSVIVSDGSSYPPYESGKTYEAGDIVTGSDGNLYQCKPWPYTGWCSNPSYAPGETVYWSD
AWDKL
>Mature_565_residues
MRGNTMKQKALYRAVAMGLSGLANVASANEMVNPDGGVVVGYWHNWCDGAGYKGGNAPCVTLDEVDPMYNVVNVSFMKVF
NTSEGRIPTFKLDPNIGLSEQQFIDQIEALNQQGRAVLIALGGADAHVELRTGDEQAFAQEIIRLTDKFGFDGLDIDLEQ
SAVTAENNQTVIPAALRLVKEHYQQQGKNFLITMAPEFPYLTEGGKYVPYITGLEGYYDWINPQFYNQGGDGIWVDGVGW
IAQNNDELKQEFIYYISDALSNGTRGFHKIPHDKLVFGIPSNIDAAATGFVQNPQDLYDAFDQLKAQGQALRGVMTWSVN
WDMGTDKNGQAYGEKFVKDYGPFIHGQTPPPSEGEPVFSGLNDVRVHHGSSFDPYAGVTASDKEDGDLTNSITVEGSVDV
NTVGTYVLVYSVKDSDNNETKQSRTVVVYSLVPEFEGVADTTIQLGDAFDPMAGVKATDAEDGDLTDQVRVEGSVDVNVL
GVYDLVYRVTDSANQTTTAQRSVIVSDGSSYPPYESGKTYEAGDIVTGSDGNLYQCKPWPYTGWCSNPSYAPGETVYWSD
AWDKL

Specific function: Unknown

COG id: COG3469

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR015520 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 61754; Mature: 61754

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGNTMKQKALYRAVAMGLSGLANVASANEMVNPDGGVVVGYWHNWCDGAGYKGGNAPCV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE
TLDEVDPMYNVVNVSFMKVFNTSEGRIPTFKLDPNIGLSEQQFIDQIEALNQQGRAVLIA
EECCCCCHHHHHEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
LGGADAHVELRTGDEQAFAQEIIRLTDKFGFDGLDIDLEQSAVTAENNQTVIPAALRLVK
ECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCEEHHHHHHHHH
EHYQQQGKNFLITMAPEFPYLTEGGKYVPYITGLEGYYDWINPQFYNQGGDGIWVDGVGW
HHHHHCCCEEEEEECCCCCEECCCCCCCCEEECCCHHHHCCCCEEECCCCCEEEECCEEE
IAQNNDELKQEFIYYISDALSNGTRGFHKIPHDKLVFGIPSNIDAAATGFVQNPQDLYDA
EECCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCCCHHHHCCCCCHHHHHHH
FDQLKAQGQALRGVMTWSVNWDMGTDKNGQAYGEKFVKDYGPFIHGQTPPPSEGEPVFSG
HHHHHHCCHHEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHCC
LNDVRVHHGSSFDPYAGVTASDKEDGDLTNSITVEGSVDVNTVGTYVLVYSVKDSDNNET
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECEEEEEEEEEECCCCCCC
KQSRTVVVYSLVPEFEGVADTTIQLGDAFDPMAGVKATDAEDGDLTDQVRVEGSVDVNVL
CCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE
GVYDLVYRVTDSANQTTTAQRSVIVSDGSSYPPYESGKTYEAGDIVTGSDGNLYQCKPWP
EHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCEEECCCCCEEEECCCC
YTGWCSNPSYAPGETVYWSDAWDKL
CCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MRGNTMKQKALYRAVAMGLSGLANVASANEMVNPDGGVVVGYWHNWCDGAGYKGGNAPCV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE
TLDEVDPMYNVVNVSFMKVFNTSEGRIPTFKLDPNIGLSEQQFIDQIEALNQQGRAVLIA
EECCCCCHHHHHEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
LGGADAHVELRTGDEQAFAQEIIRLTDKFGFDGLDIDLEQSAVTAENNQTVIPAALRLVK
ECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCEEHHHHHHHHH
EHYQQQGKNFLITMAPEFPYLTEGGKYVPYITGLEGYYDWINPQFYNQGGDGIWVDGVGW
HHHHHCCCEEEEEECCCCCEECCCCCCCCEEECCCHHHHCCCCEEECCCCCEEEECCEEE
IAQNNDELKQEFIYYISDALSNGTRGFHKIPHDKLVFGIPSNIDAAATGFVQNPQDLYDA
EECCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCCCHHHHCCCCCHHHHHHH
FDQLKAQGQALRGVMTWSVNWDMGTDKNGQAYGEKFVKDYGPFIHGQTPPPSEGEPVFSG
HHHHHHCCHHEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHCC
LNDVRVHHGSSFDPYAGVTASDKEDGDLTNSITVEGSVDVNTVGTYVLVYSVKDSDNNET
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECEEEEEEEEEECCCCCCC
KQSRTVVVYSLVPEFEGVADTTIQLGDAFDPMAGVKATDAEDGDLTDQVRVEGSVDVNVL
CCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE
GVYDLVYRVTDSANQTTTAQRSVIVSDGSSYPPYESGKTYEAGDIVTGSDGNLYQCKPWP
EHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCEEECCCCCEEEECCCC
YTGWCSNPSYAPGETVYWSDAWDKL
CCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1729234 [H]