| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976866
Identifier: 156976866
GI number: 156976866
Start: 851974
End: 852876
Strand: Direct
Name: 156976866
Synonym: VIBHAR_05642
Alternate gene names: NA
Gene position: 851974-852876 (Clockwise)
Preceding gene: 156976865
Following gene: 156976867
Centisome position: 38.66
GC content: 42.3
Gene sequence:
>903_bases ATGCATATTAATAAAACACAAGGACAATGGATGAATGAATCAGTGTATCGTGCAATGTCTTGGCTAAAAGCAATACTGGA TGGTCAAGGGGTTCGCTACCAAATTGTTGGAGGTTTCGCCGCCCATCTTCATGGAGGTTCTCGGCCAATTGTTGACATCG ACCTCTATATTGAAAAAGAGGATGTACATGCGCTTCTACCGTTCTTTCAACCTTTTGTAAGTAAACCGCTTAAACACTAC TCTGAAGAAGGGTGGGACCTAGAATATCTCCAGTTGATTTATGAAAACCAGAAAATCGAGATTGGTTTGAGTCCGGGAAC TAAGATCTTTAACACCTCGAGCCAACAATTGGTATCACTCGATGTTGATTTGGCGGAATCCGTACAGCGTGACTTTCATG GGCTTGCTTTACCTGTTATCAATACTAACTCTCTCATTGAGTACAAAAGAGTTCTTAATCGGGAAGTCGATCGAATCGAC ATTAAAGAGCTGGAAGATATCCAACAAGCTGAGAATGCTCAAACCTTGGGCCATTTCAGTTCCTTGTTCGACATCGCGCG GAGAAAAGCGAAATACGATAATACCAACACTTGGTACAAAGGTTCGGAGACGTACTTTGATGCTTTATATCAAGAGCTTG AAGAAGTCGGTGAAGAAATCACTCAAACACGTCTTTGTTATTTAGAGGATGAGCTTGGCGATGTGCTTTGGAACTATTTA AATCTGCTCATGGCATTGGAAAAAGAGCAAGGTATCGATCCTACCTCGGTATTGAGCAGAGCGGTTAACAAGTATCAGCA GCGAGTCGCTACCATTGAAAACAATGGAAGCTGGGCGGATGTGAAGGCCGAGCAAAAGCGAAAGTTACAACAAGAATACC TAGGTGCGATGAATGAAAATTAA
Upstream 100 bases:
>100_bases TTGATCCACTTAACGGTTCGATAGACGCAACGAAAGTGTAAGGCACTTTAACCTTTTATTTTTAAAATAAAACACTTACA GTGATTGATTACTGAAATGG
Downstream 100 bases:
>100_bases GCCAGAGCTCGAACTGACACAAGAAGAGCATCAAGCGATCATGACACTGCGAAATGCAGCATTCCCAGATCACCAGTCGG CCCATTCTTACTACAAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Pyrophosphatase
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MHINKTQGQWMNESVYRAMSWLKAILDGQGVRYQIVGGFAAHLHGGSRPIVDIDLYIEKEDVHALLPFFQPFVSKPLKHY SEEGWDLEYLQLIYENQKIEIGLSPGTKIFNTSSQQLVSLDVDLAESVQRDFHGLALPVINTNSLIEYKRVLNREVDRID IKELEDIQQAENAQTLGHFSSLFDIARRKAKYDNTNTWYKGSETYFDALYQELEEVGEEITQTRLCYLEDELGDVLWNYL NLLMALEKEQGIDPTSVLSRAVNKYQQRVATIENNGSWADVKAEQKRKLQQEYLGAMNEN
Sequences:
>Translated_300_residues MHINKTQGQWMNESVYRAMSWLKAILDGQGVRYQIVGGFAAHLHGGSRPIVDIDLYIEKEDVHALLPFFQPFVSKPLKHY SEEGWDLEYLQLIYENQKIEIGLSPGTKIFNTSSQQLVSLDVDLAESVQRDFHGLALPVINTNSLIEYKRVLNREVDRID IKELEDIQQAENAQTLGHFSSLFDIARRKAKYDNTNTWYKGSETYFDALYQELEEVGEEITQTRLCYLEDELGDVLWNYL NLLMALEKEQGIDPTSVLSRAVNKYQQRVATIENNGSWADVKAEQKRKLQQEYLGAMNEN >Mature_300_residues MHINKTQGQWMNESVYRAMSWLKAILDGQGVRYQIVGGFAAHLHGGSRPIVDIDLYIEKEDVHALLPFFQPFVSKPLKHY SEEGWDLEYLQLIYENQKIEIGLSPGTKIFNTSSQQLVSLDVDLAESVQRDFHGLALPVINTNSLIEYKRVLNREVDRID IKELEDIQQAENAQTLGHFSSLFDIARRKAKYDNTNTWYKGSETYFDALYQELEEVGEEITQTRLCYLEDELGDVLWNYL NLLMALEKEQGIDPTSVLSRAVNKYQQRVATIENNGSWADVKAEQKRKLQQEYLGAMNEN
Specific function: Unknown
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34615; Mature: 34615
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHINKTQGQWMNESVYRAMSWLKAILDGQGVRYQIVGGFAAHLHGGSRPIVDIDLYIEKE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCEEEEEEEEEHH DVHALLPFFQPFVSKPLKHYSEEGWDLEYLQLIYENQKIEIGLSPGTKIFNTSSQQLVSL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCEECCCCHHEEEE DVDLAESVQRDFHGLALPVINTNSLIEYKRVLNREVDRIDIKELEDIQQAENAQTLGHFS CHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SLFDIARRKAKYDNTNTWYKGSETYFDALYQELEEVGEEITQTRLCYLEDELGDVLWNYL HHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLMALEKEQGIDPTSVLSRAVNKYQQRVATIENNGSWADVKAEQKRKLQQEYLGAMNEN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHINKTQGQWMNESVYRAMSWLKAILDGQGVRYQIVGGFAAHLHGGSRPIVDIDLYIEKE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCEEEEEEEEEHH DVHALLPFFQPFVSKPLKHYSEEGWDLEYLQLIYENQKIEIGLSPGTKIFNTSSQQLVSL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCEECCCCHHEEEE DVDLAESVQRDFHGLALPVINTNSLIEYKRVLNREVDRIDIKELEDIQQAENAQTLGHFS CHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SLFDIARRKAKYDNTNTWYKGSETYFDALYQELEEVGEEITQTRLCYLEDELGDVLWNYL HHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLMALEKEQGIDPTSVLSRAVNKYQQRVATIENNGSWADVKAEQKRKLQQEYLGAMNEN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA