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The map label for this gene is 156976854

Identifier: 156976854

GI number: 156976854

Start: 842476

End: 843354

Strand: Reverse

Name: 156976854

Synonym: VIBHAR_05630

Alternate gene names: NA

Gene position: 843354-842476 (Counterclockwise)

Preceding gene: 156976861

Following gene: 156976853

Centisome position: 38.26

GC content: 45.62

Gene sequence:

>879_bases
ATGATTCCCATTGGCGTGCGCTTTATGGTGCTGTCCGCGTTTGGTTTTGCACTGATGTCTGCCACCGTAAAGCACGTTAG
CTTACATGGTATACCTGTATTTGAAATCGTAGCTGCTAGGGCTCTGGTTTCGCTTGTGATCAGCTATCTCGACGTGAAAC
GCAAAGGTATTTCTGTTTGGGGAAATAATAAGCCCTTGCTCTTTGCTCGCGGTGCTGTTGGAACCATGGCTTTGATGTGT
GTGTACTATTCCGTTACAACGCTACCACTCGCGGAAGCGACCATTTTTCAGTACATCCACCCTGTATTTACTGCCTTACT
TGCCGTTTTTTTCCTTAAAGAGCGTATCCAGTCTTCGACGTTTATTTGTATCGCCTTGTGTTTACTTGGGGTATACGTCA
TGGTGAGACCAGAAACTGGTCCAGATACGGAGCATGCCTTACCAATGTTCAGTGTGATGATCGCCATCTTAGGTGCTTTT
GGTAGCTCCATCGCGTACGTAATCGTACGTAAGTTGAGTCAGACTGAAGACAGCTCCGTGATCATATTTTACTTCCCGTT
GGTGGCACTGCCGGCATCGATTCTTTTGATTGGGGATCAATTCGTCATGCCAGATTTGTATCTAACCATGATGCTAGTTT
TGGTCGGCGTCTTTACTCAGATAGGACAGTTGGGATTAACAAAGGCAATGCAAACACAAGAAGCAGGAAAAGCATCAGCC
TACTCTTATGTTCAGATCATTTTCTCTGTCGTTTTGGGCATCGTCTTCTTTGGTGAATTACCTTCGGCGTGGACATACTT
AGGTGGCGCATTAATCGTGACAGGTGCGCTGATCAACGTATTTGGTCAGCATCTCAAGTTGCCGTTTATAAAACGATAG

Upstream 100 bases:

>100_bases
AGCCTTAATCACAAGGTGCTGATCTTTTTGTGAGTTTAGTGTGCTAAAGTGCGATCTCCCGCAATAAACGAGCAGTAAGA
TGTCTAACTCACTCAACTCA

Downstream 100 bases:

>100_bases
AAATCCCCCTTCTACTTACGTTTCGTTTGATCGAAAAACAATAAAGCCAGAGCATCACTCTAATGCCGTTCACTTAAGGT
GATCGGCATTGTTTTTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIPIGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDVKRKGISVWGNNKPLLFARGAVGTMALMC
VYYSVTTLPLAEATIFQYIHPVFTALLAVFFLKERIQSSTFICIALCLLGVYVMVRPETGPDTEHALPMFSVMIAILGAF
GSSIAYVIVRKLSQTEDSSVIIFYFPLVALPASILLIGDQFVMPDLYLTMMLVLVGVFTQIGQLGLTKAMQTQEAGKASA
YSYVQIIFSVVLGIVFFGELPSAWTYLGGALIVTGALINVFGQHLKLPFIKR

Sequences:

>Translated_292_residues
MIPIGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDVKRKGISVWGNNKPLLFARGAVGTMALMC
VYYSVTTLPLAEATIFQYIHPVFTALLAVFFLKERIQSSTFICIALCLLGVYVMVRPETGPDTEHALPMFSVMIAILGAF
GSSIAYVIVRKLSQTEDSSVIIFYFPLVALPASILLIGDQFVMPDLYLTMMLVLVGVFTQIGQLGLTKAMQTQEAGKASA
YSYVQIIFSVVLGIVFFGELPSAWTYLGGALIVTGALINVFGQHLKLPFIKR
>Mature_292_residues
MIPIGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDVKRKGISVWGNNKPLLFARGAVGTMALMC
VYYSVTTLPLAEATIFQYIHPVFTALLAVFFLKERIQSSTFICIALCLLGVYVMVRPETGPDTEHALPMFSVMIAILGAF
GSSIAYVIVRKLSQTEDSSVIIFYFPLVALPASILLIGDQFVMPDLYLTMMLVLVGVFTQIGQLGLTKAMQTQEAGKASA
YSYVQIIFSVVLGIVFFGELPSAWTYLGGALIVTGALINVFGQHLKLPFIKR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Homo sapiens, GI23397492, Length=300, Percent_Identity=30.3333333333333, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI197927233, Length=300, Percent_Identity=30.3333333333333, Blast_Score=98, Evalue=9e-21,
Organism=Saccharomyces cerevisiae, GI6323909, Length=233, Percent_Identity=24.4635193133047, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6324991, Length=240, Percent_Identity=23.75, Blast_Score=73, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24645940, Length=294, Percent_Identity=29.2517006802721, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31806; Mature: 31806

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]