Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976843

Identifier: 156976843

GI number: 156976843

Start: 825206

End: 825970

Strand: Direct

Name: 156976843

Synonym: VIBHAR_05619

Alternate gene names: NA

Gene position: 825206-825970 (Clockwise)

Preceding gene: 156976842

Following gene: 156976844

Centisome position: 37.44

GC content: 39.74

Gene sequence:

>765_bases
ATGAACATTGTCGTTGTACCAAGAGAACAAAGAGTGCCCACAACAGGTATGAATACGGCTTACTTGCATGTTGATCGATG
GAATGACTTTTCATTTGTCACTATGTTCTATATGACGGTACTCGATGGTAACGGTAAGAGTCATGATATCGGCCAAGTAA
AAATAGGCTTCAAGGGACAAACAATTGAGAAGTCAACATATAAGACATTAAATAACTCGTTCTTAAGTTTACCTGACGGC
TATTTTTCTGTAGGTCAAGATGTTGAATACTATAAAAATATGGTTCAACTGCCAGAATCTACGAGGATGGTATTATTTAA
AGGGCTGAAAGACATTGCTTTTGACTCTAGCCTTATAGATTTGGCTCAGCACGAGGACGTTTTTCGTACATCTTTGCTTA
GAGATGTAAGCTTATCTGTTATCAAAGGGCAGTTTGCTAGAGTGCTTGATGGAAGCAACCCGTTAACCGACTTTGAGTTC
AAGTTCGTCAGACCGGTTCAAGAAAAAATGTCCGGTATCGAGTTGAAGTTTAGTGTTAATGTTGGGGACAAACCAACAAC
AAATATTCATGCGATTATAGGACGTAACGGGGTCGGGAAAACAACGCTTCTAAACGGAATGATTGAAGCAGTGACCAGTA
AAGGACAATCAGTAGCGAAATTCTATGACGTTGAAGGTTGGCGTAATGACCCCATTGATACAGATTATTTCAGTAGTCTC
GTATCTGTGTCATTTAGAGAAATGGCCCCCAATTTTCGGACATGA

Upstream 100 bases:

>100_bases
GAGGTTTGATACTGGGGGGTACATCACGTGATACGCAGTCAGCTTGTTGTTGCTCAATTCCTCCAATCAAAAATTACAAG
GTAAGTAAGAAGGAAAAACA

Downstream 100 bases:

>100_bases
CTTTAAGTGATTGATCTGTTTGTATAGTACCTAAAAATACTGGAACAGATTATGACTAGAAAACGTAGAAACCACTCACC
CGAATTTAAAGCTAAGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQTIEKSTYKTLNNSFLSLPDG
YFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLIDLAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEF
KFVRPVQEKMSGIELKFSVNVGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL
VSVSFREMAPNFRT

Sequences:

>Translated_254_residues
MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQTIEKSTYKTLNNSFLSLPDG
YFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLIDLAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEF
KFVRPVQEKMSGIELKFSVNVGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL
VSVSFREMAPNFRT
>Mature_254_residues
MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQTIEKSTYKTLNNSFLSLPDG
YFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLIDLAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEF
KFVRPVQEKMSGIELKFSVNVGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL
VSVSFREMAPNFRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28616; Mature: 28616

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQ
CEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCC
TIEKSTYKTLNNSFLSLPDGYFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLID
CCCHHHHHHHCCCEEECCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
LAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEFKFVRPVQEKMSGIELKFSVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEE
VGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCHHHHHHH
VSVSFREMAPNFRT
HHHHHHHHCCCCCC
>Mature Secondary Structure
MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQ
CEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCC
TIEKSTYKTLNNSFLSLPDGYFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLID
CCCHHHHHHHCCCEEECCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
LAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEFKFVRPVQEKMSGIELKFSVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEE
VGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCHHHHHHH
VSVSFREMAPNFRT
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA