Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976834

Identifier: 156976834

GI number: 156976834

Start: 813328

End: 813900

Strand: Reverse

Name: 156976834

Synonym: VIBHAR_05610

Alternate gene names: NA

Gene position: 813900-813328 (Counterclockwise)

Preceding gene: 156976846

Following gene: 156976832

Centisome position: 36.93

GC content: 45.38

Gene sequence:

>573_bases
ATGAAAAAGGCTTTCTCTACTCTAAACATCGTAGTCGCACTGTTTTCTAGTGCCGCATCCGCTGCAGACAACTACACTCT
TGATTCCGATCTCTCTTCCCTAAGCTTCGCAACAATCAAAAAGCAGTATATTGTCGAGCCAGCAACCATTGATGCCCTAT
CCGGCACACTTAACAGTGATGGGCAATTTGACGTCGCTATCGACCTAAACAGCATCAATACAGGTATTCCAATCCGAAAC
ACACGCCTGAATGAGATCTTCTTTGAATCTGCAAAACACGCACCAGTAAAAGTGGCAGGAAAAGTGGATTGGGCCGCTCT
GGGTGAAGGCTCACACAAGGTAAAAGTACCGGCTGAAGTGACGTTGTTTGGTAAGACGAAATCCGTAGAATTCCCTGTTG
TGGTTCTCAATGCAGGTAATACGGTCATGGTAAGTTCAAGTGCACCTGTCATCATCGGTGCTAGTGATTTTGGTATCCCA
ACGGAAAACTTGACCAACTTGGCGGCAACGGTTGGTGGAATTAAGATTTCGGATAGAGTTCCACTTGCTCTGAACCTAAC
CTTTAAAAAGTAG

Upstream 100 bases:

>100_bases
AAAATCATTGAAATCAATCGATTTAATTCCTTATTAACTTTTATAAATCCGAACTACTATCATGGAAAACCATCGCTCAA
CATCAATAAGGTTAACAATA

Downstream 100 bases:

>100_bases
TTTAGTAGCCCAAAAGCGGCTTGCTAACTGGAAACAAAGGCTTGGATAGGCTCACCAAGCCTTTTTTATGCGCTATCAAA
CAAACCTTTCTTTAAGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: YceI Like Family Protein; YceI Like Family

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSDGQFDVAIDLNSINTGIPIRN
TRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEVTLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIP
TENLTNLAATVGGIKISDRVPLALNLTFKK

Sequences:

>Translated_190_residues
MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSDGQFDVAIDLNSINTGIPIRN
TRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEVTLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIP
TENLTNLAATVGGIKISDRVPLALNLTFKK
>Mature_190_residues
MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSDGQFDVAIDLNSINTGIPIRN
TRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEVTLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIP
TENLTNLAATVGGIKISDRVPLALNLTFKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19969; Mature: 19969

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSD
CCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHEEEHHHHEECCCEEEEECCCCCCC
GQFDVAIDLNSINTGIPIRNTRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEV
CCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCEEEECCCCCEEECCEEE
TLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIPTENLTNLAATVGGIKISDRV
EEEECCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCEEECCCC
PLALNLTFKK
CEEEEEEECC
>Mature Secondary Structure
MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSD
CCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHEEEHHHHEECCCEEEEECCCCCCC
GQFDVAIDLNSINTGIPIRNTRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEV
CCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCEEEECCCCCEEECCEEE
TLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIPTENLTNLAATVGGIKISDRV
EEEECCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCEEECCCC
PLALNLTFKK
CEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA