Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is yceJ [C]

Identifier: 156976833

GI number: 156976833

Start: 812804

End: 813229

Strand: Direct

Name: yceJ [C]

Synonym: VIBHAR_05609

Alternate gene names: 156976833

Gene position: 812804-813229 (Clockwise)

Preceding gene: 156976831

Following gene: 156976835

Centisome position: 36.88

GC content: 42.02

Gene sequence:

>426_bases
ATGGCTACACTGGATTATGGCAGTGATTATTATCTATGCAACGATCGCTTCGGTACTATTGATTGTGAGGTGGGGGTGGT
CATTTTTCGTGAGACACCAGAGCTACCAGACACAATTCCAAACACTCAGAAAAGCATGGCCAAACTTGCACATGGCACTC
TCTATCTAGTGATGTTCGTTGTGTTTGTTAGCGGTTTTTTAATGCTTAAGCACGAGTACCCATTCTTTTGGCTGTTTACT
ATTCCAAACTCAATTTCAAATGCTGAAGTGAATGCGTTCTTTTTTATGGTTCATCGTTTTGGTTGCGCGACTCTGGCAAG
CTTGGTTTTGCTACACGCGCTGGCCGCTCTGAAACATCATTTCGTGAATAAGAATGATGTATTAAAAAGCATGGCGTTTA
ACTTGTCCAAGCTAAGTCGGTCATAA

Upstream 100 bases:

>100_bases
TCAGTGGTGACAATATGTCGAAATTAGATTCTGGTCAGAACCAGAAAGCGATTCCGCACGTCCAAAATACATCCACTCAA
CAATACGACGCGTTCAGCAA

Downstream 100 bases:

>100_bases
ACCTTAAAGAAAGGTTTGTTTGATAGCGCATAAAAAAGGCTTGGTGAGCCTATCCAAGCCTTTGTTTCCAGTTAGCAAGC
CGCTTTTGGGCTACTAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MATLDYGSDYYLCNDRFGTIDCEVGVVIFRETPELPDTIPNTQKSMAKLAHGTLYLVMFVVFVSGFLMLKHEYPFFWLFT
IPNSISNAEVNAFFFMVHRFGCATLASLVLLHALAALKHHFVNKNDVLKSMAFNLSKLSRS

Sequences:

>Translated_141_residues
MATLDYGSDYYLCNDRFGTIDCEVGVVIFRETPELPDTIPNTQKSMAKLAHGTLYLVMFVVFVSGFLMLKHEYPFFWLFT
IPNSISNAEVNAFFFMVHRFGCATLASLVLLHALAALKHHFVNKNDVLKSMAFNLSKLSRS
>Mature_140_residues
ATLDYGSDYYLCNDRFGTIDCEVGVVIFRETPELPDTIPNTQKSMAKLAHGTLYLVMFVVFVSGFLMLKHEYPFFWLFTI
PNSISNAEVNAFFFMVHRFGCATLASLVLLHALAALKHHFVNKNDVLKSMAFNLSKLSRS

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15981; Mature: 15850

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLDYGSDYYLCNDRFGTIDCEVGVVIFRETPELPDTIPNTQKSMAKLAHGTLYLVMFV
CCCCCCCCCEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VFVSGFLMLKHEYPFFWLFTIPNSISNAEVNAFFFMVHRFGCATLASLVLLHALAALKHH
HHHHHHHHEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVNKNDVLKSMAFNLSKLSRS
HCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATLDYGSDYYLCNDRFGTIDCEVGVVIFRETPELPDTIPNTQKSMAKLAHGTLYLVMFV
CCCCCCCCEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VFVSGFLMLKHEYPFFWLFTIPNSISNAEVNAFFFMVHRFGCATLASLVLLHALAALKHH
HHHHHHHHEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVNKNDVLKSMAFNLSKLSRS
HCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA