| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is cyaB [H]
Identifier: 156976823
GI number: 156976823
Start: 800262
End: 801944
Strand: Direct
Name: cyaB [H]
Synonym: VIBHAR_05599
Alternate gene names: 156976823
Gene position: 800262-801944 (Clockwise)
Preceding gene: 156976822
Following gene: 156976824
Centisome position: 36.31
GC content: 45.63
Gene sequence:
>1683_bases ATGAAGTCCATATTGTTGGTTGACGACAGCAAAACGGTTCTGCTCTACATGACCAGTGCATTGCAAAAGCAAGGGTACGA GGTCATTGCCGTTGAAGATGGTGAGTCTGCGTTAGAAGTACTGAATCACCGCACTGACATTCAGTTTGTCCTCAGTGATT TGATGATGCCGGGCATTAGTGGCATTGAGCTTTGTCGTGAGCTTAAGTCGTCGGCGTTTTCTCGTTATATCTTCTTTGTT CTCCTTTCTTCATATAACGATGAAGAATCCATCATCAAAGGCATGGATGCAGGTGCCGATGACTTTGTTGATAAGAAGAC CTCTGTCGCTGAGCTGCAAGCGCGGATTCGAGCGGGTTTTCGTACTTTAGAGCTGCACTATACGCTCACGACAAAAAACC AAGAGCTCGATTTAGCGTATCAAACCATTCAGCAGGATCTGGATTCTGCTGGAGAGTTAATGGGGCAACTGTTGCCCGTT GAAGAACAGATTCACACGGCACAATTTAGATTCACTTATGTCCCTTGTACCAAGATCGGTGGGGATATGTTGGGTTATGT CGAGCTTGATGAATCGCATGTTGCGTTTTATGTCTTCGATGTTTCCGGGCACGGTATTTCTTCGGCGTTAATGGCGTTCT CGATTCAACAGGCTTTGTTACAACGTAACAAATTGGAGTCGATAACGTTAGATTGGAGTGACAACGAATACCGCATCAGT AAGCCTGCGGCTGTGATTGAAAGGCTCAATCGACGCTACCAGCAAACGCAGAACGGCAAGCTCTATTTCACTATCGAATA CGCCGTGTTGAACACCAAAACCGGTGAACTAAACTATTGCACAGCAGGGCATCCTAAATTTGTTTGGCAACAGACGAAAC AAAACCGCTTGGAACTTGTTGGCGACAACAACTTCATTGTCGGGGCATTGGAGCCAATGATATACCAAGGTGGACGTATC CAACTCAAGCCTGATGACGCGCTTTGGTTTTTCTCCGATGGCTTATTGGAAGCTAAGCAAGGCGAGGAGCTTTACGGCAT TGACCGACTGTTAGTCAACATCGAAAGGAGTAAAGCGATGCCAGAAAAAGCACAAACTAATGCTGTTTTAAAGCAAGTGC AAAACTGGCAAGGAAAACCAGAACTCGACGATGATGTGAGCTTGTTGAAAGTGCAATGGTTGGGCTGTGCACAATCGCGA GCCGTTAATTCGCCGAGGGTGGTGTTCCAGAAATCCTATCAAGCATCTTTAGAAGTTTCGCGCCAAGCGAGTCTCGAATT GGTTGAGTTCCTTCAACAACATTCGGTTTCTTCTCATGCCATGCAAGCGTTGGAGTTATGTGTGGTAGAACTCATGAACA ATGCGTTTATTCATGCCTACCAAGAGCAAGCAGGGAAAACGGTTGAGTTAGAATGCGAAGTGCTTCGAGGTGAAAAAACA AAAGTTGAGCTGCGCGTGGCTGATTACGGAAACGGTATTGATGACGACACGTTCAAAGGTCACATCTCTAAGCAAATTGA AGCCCCTAACTTGCTCGATGAAGACAGTTGGTTGCCTTCTGGGCGAGGGCTAATATTGATCGCTCAAATGACAAACGGGT TTTCTGTATCACATCAAGGGGAGCGTAATTGTTTTACGGTGGTGATATCTCTCGACGAAAAGGCAAAGTCTATAATTCTT TAA
Upstream 100 bases:
>100_bases CCGTTATCAACACCAACTTTTAGCGGAAGATTACAGCCGTTTCAGAGATGCCCAATCCATGAATAGCGTGCTGCAATAGA ACAAACGGGCAAGGAGACGC
Downstream 100 bases:
>100_bases AGGCTTTACTCGTGGAAGTCAAACATGTCGCAAATAGAAATCAAACGGGACCGGCCACGTGTCGGAAAGCAGACTGGATT GATGCGACAAAAAGCTGTAT
Product: response regulator receiver
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MKSILLVDDSKTVLLYMTSALQKQGYEVIAVEDGESALEVLNHRTDIQFVLSDLMMPGISGIELCRELKSSAFSRYIFFV LLSSYNDEESIIKGMDAGADDFVDKKTSVAELQARIRAGFRTLELHYTLTTKNQELDLAYQTIQQDLDSAGELMGQLLPV EEQIHTAQFRFTYVPCTKIGGDMLGYVELDESHVAFYVFDVSGHGISSALMAFSIQQALLQRNKLESITLDWSDNEYRIS KPAAVIERLNRRYQQTQNGKLYFTIEYAVLNTKTGELNYCTAGHPKFVWQQTKQNRLELVGDNNFIVGALEPMIYQGGRI QLKPDDALWFFSDGLLEAKQGEELYGIDRLLVNIERSKAMPEKAQTNAVLKQVQNWQGKPELDDDVSLLKVQWLGCAQSR AVNSPRVVFQKSYQASLEVSRQASLELVEFLQQHSVSSHAMQALELCVVELMNNAFIHAYQEQAGKTVELECEVLRGEKT KVELRVADYGNGIDDDTFKGHISKQIEAPNLLDEDSWLPSGRGLILIAQMTNGFSVSHQGERNCFTVVISLDEKAKSIIL
Sequences:
>Translated_560_residues MKSILLVDDSKTVLLYMTSALQKQGYEVIAVEDGESALEVLNHRTDIQFVLSDLMMPGISGIELCRELKSSAFSRYIFFV LLSSYNDEESIIKGMDAGADDFVDKKTSVAELQARIRAGFRTLELHYTLTTKNQELDLAYQTIQQDLDSAGELMGQLLPV EEQIHTAQFRFTYVPCTKIGGDMLGYVELDESHVAFYVFDVSGHGISSALMAFSIQQALLQRNKLESITLDWSDNEYRIS KPAAVIERLNRRYQQTQNGKLYFTIEYAVLNTKTGELNYCTAGHPKFVWQQTKQNRLELVGDNNFIVGALEPMIYQGGRI QLKPDDALWFFSDGLLEAKQGEELYGIDRLLVNIERSKAMPEKAQTNAVLKQVQNWQGKPELDDDVSLLKVQWLGCAQSR AVNSPRVVFQKSYQASLEVSRQASLELVEFLQQHSVSSHAMQALELCVVELMNNAFIHAYQEQAGKTVELECEVLRGEKT KVELRVADYGNGIDDDTFKGHISKQIEAPNLLDEDSWLPSGRGLILIAQMTNGFSVSHQGERNCFTVVISLDEKAKSIIL >Mature_560_residues MKSILLVDDSKTVLLYMTSALQKQGYEVIAVEDGESALEVLNHRTDIQFVLSDLMMPGISGIELCRELKSSAFSRYIFFV LLSSYNDEESIIKGMDAGADDFVDKKTSVAELQARIRAGFRTLELHYTLTTKNQELDLAYQTIQQDLDSAGELMGQLLPV EEQIHTAQFRFTYVPCTKIGGDMLGYVELDESHVAFYVFDVSGHGISSALMAFSIQQALLQRNKLESITLDWSDNEYRIS KPAAVIERLNRRYQQTQNGKLYFTIEYAVLNTKTGELNYCTAGHPKFVWQQTKQNRLELVGDNNFIVGALEPMIYQGGRI QLKPDDALWFFSDGLLEAKQGEELYGIDRLLVNIERSKAMPEKAQTNAVLKQVQNWQGKPELDDDVSLLKVQWLGCAQSR AVNSPRVVFQKSYQASLEVSRQASLELVEFLQQHSVSSHAMQALELCVVELMNNAFIHAYQEQAGKTVELECEVLRGEKT KVELRVADYGNGIDDDTFKGHISKQIEAPNLLDEDSWLPSGRGLILIAQMTNGFSVSHQGERNCFTVVISLDEKAKSIIL
Specific function: This Protein Is A Positive Regulator For The Phosphate Regulon. Transcription Of This Operon Is Positively Regulated By Phob And Phor When Phosphate Is Limited. [C]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=122, Percent_Identity=34.4262295081967, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082012, Length=144, Percent_Identity=29.8611111111111, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789809, Length=118, Percent_Identity=33.8983050847458, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1786911, Length=170, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 63049; Mature: 63049
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILLVDDSKTVLLYMTSALQKQGYEVIAVEDGESALEVLNHRTDIQFVLSDLMMPGIS CCEEEEECCCCEEEEEEEHHHHHCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCC GIELCRELKSSAFSRYIFFVLLSSYNDEESIIKGMDAGADDFVDKKTSVAELQARIRAGF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCC RTLELHYTLTTKNQELDLAYQTIQQDLDSAGELMGQLLPVEEQIHTAQFRFTYVPCTKIG EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEEEEEEEEHHHCC GDMLGYVELDESHVAFYVFDVSGHGISSALMAFSIQQALLQRNKLESITLDWSDNEYRIS CCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEC KPAAVIERLNRRYQQTQNGKLYFTIEYAVLNTKTGELNYCTAGHPKFVWQQTKQNRLELV CHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEECCCCHHHHHHCCCCCEEEE GDNNFIVGALEPMIYQGGRIQLKPDDALWFFSDGLLEAKQGEELYGIDRLLVNIERSKAM CCCCEEEEECCHHHCCCCEEEECCCCEEEEEECCCEECCCCCCHHCHHHHEEEEHHHHCC PEKAQTNAVLKQVQNWQGKPELDDDVSLLKVQWLGCAQSRAVNSPRVVFQKSYQASLEVS CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCEEEECCHHHHHHHH RQASLELVEFLQQHSVSSHAMQALELCVVELMNNAFIHAYQEQAGKTVELECEVLRGEKT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHEEEEHHHCCCEEEEEEEEECCCCE KVELRVADYGNGIDDDTFKGHISKQIEAPNLLDEDSWLPSGRGLILIAQMTNGFSVSHQG EEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCC ERNCFTVVISLDEKAKSIIL CCCEEEEEEEECCCHHHCCC >Mature Secondary Structure MKSILLVDDSKTVLLYMTSALQKQGYEVIAVEDGESALEVLNHRTDIQFVLSDLMMPGIS CCEEEEECCCCEEEEEEEHHHHHCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCC GIELCRELKSSAFSRYIFFVLLSSYNDEESIIKGMDAGADDFVDKKTSVAELQARIRAGF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCC RTLELHYTLTTKNQELDLAYQTIQQDLDSAGELMGQLLPVEEQIHTAQFRFTYVPCTKIG EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEEEEEEEEHHHCC GDMLGYVELDESHVAFYVFDVSGHGISSALMAFSIQQALLQRNKLESITLDWSDNEYRIS CCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEC KPAAVIERLNRRYQQTQNGKLYFTIEYAVLNTKTGELNYCTAGHPKFVWQQTKQNRLELV CHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEECCCCHHHHHHCCCCCEEEE GDNNFIVGALEPMIYQGGRIQLKPDDALWFFSDGLLEAKQGEELYGIDRLLVNIERSKAM CCCCEEEEECCHHHCCCCEEEECCCCEEEEEECCCEECCCCCCHHCHHHHEEEEHHHHCC PEKAQTNAVLKQVQNWQGKPELDDDVSLLKVQWLGCAQSRAVNSPRVVFQKSYQASLEVS CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCEEEECCHHHHHHHH RQASLELVEFLQQHSVSSHAMQALELCVVELMNNAFIHAYQEQAGKTVELECEVLRGEKT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHEEEEHHHCCCEEEEEEEEECCCCE KVELRVADYGNGIDDDTFKGHISKQIEAPNLLDEDSWLPSGRGLILIAQMTNGFSVSHQG EEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCC ERNCFTVVISLDEKAKSIIL CCCEEEEEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]