| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976810
Identifier: 156976810
GI number: 156976810
Start: 790785
End: 791366
Strand: Direct
Name: 156976810
Synonym: VIBHAR_05586
Alternate gene names: NA
Gene position: 790785-791366 (Clockwise)
Preceding gene: 156976809
Following gene: 156976811
Centisome position: 35.88
GC content: 44.5
Gene sequence:
>582_bases ATGACTCAATCAACGTCAAAAACACCCATTATAGTATGCTGCGATAGCCTCCAAGAGCAGGCTCGATTGTCCGGTTTGTT GAGCAAAGATTACGACAACATCATTGGCTGCCAATTGGCACAACTAGAAACGCTTATGCAGCGAGAACCGTCAGCAAGCG TTGTGGTTGGATGGCAGCAACCAACCGCGGAACTGCGTTTGATCGTCGATTTCTGCCGCAGAAAATCGGCACCACTTCTT ATCGTTTTAAAGCAGTTATCATCTAATGATATCAATCGGTTATCGGAAAAAATGGACTATGTGCTCATGCCGCATGATAG TGAGTTTGCACTTCAACCTTGGATTGAACATGCGACATTAGTGAGAGCGAAATTCGAAAGTATGCAATCGGAAATTGAAT CGCTGACCCACAAGATTGAAGAGCGCAAGCTGGTGGAAAAAGCTAAAGGTCTGCTGATGAAGATGCACAGCGTTGATGAA GATCAGGCTTATAAAGCGCTTAGAAATTCAGCCATGCAATCGAGCCAAACGCTCGCACAAGTTGCCAAGAATTTGATAAC TACTTTGGAAGTGTTGGATTAG
Upstream 100 bases:
>100_bases TTCAAAGAACATCTCGCCTCTAGTTAAAACGCTTCAACTTTAGTTGGCACATTCCTTGTTATGTCTCTCTTAGTGAGTGA GATATAAACAAGGAATGTGC
Downstream 100 bases:
>100_bases TTGCTCTACCACTTTGGGGTTAGGGCGCATTTTCTAACGTGGTGCGTGTTGCACTATCAGCAAGCAATAACAGGGAATAA GAAACGGTAGAACAAGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator ReceiverANTAR; Response Regulator; Response Regulator Receiver/ANTAR Domain-Containing Protein
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQPTAELRLIVDFCRRKSAPLL IVLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATLVRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDE DQAYKALRNSAMQSSQTLAQVAKNLITTLEVLD
Sequences:
>Translated_193_residues MTQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQPTAELRLIVDFCRRKSAPLL IVLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATLVRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDE DQAYKALRNSAMQSSQTLAQVAKNLITTLEVLD >Mature_192_residues TQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQPTAELRLIVDFCRRKSAPLLI VLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATLVRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDED QAYKALRNSAMQSSQTLAQVAKNLITTLEVLD
Specific function: Unknown
COG id: COG3707
COG function: function code T; Response regulator with putative antiterminator output domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21833; Mature: 21701
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50921 ANTAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQ CCCCCCCCCEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC PTAELRLIVDFCRRKSAPLLIVLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATL CHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH VRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDEDQAYKALRNSAMQSSQTLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VAKNLITTLEVLD HHHHHHHHHHHCC >Mature Secondary Structure TQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQ CCCCCCCCEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC PTAELRLIVDFCRRKSAPLLIVLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATL CHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH VRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDEDQAYKALRNSAMQSSQTLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VAKNLITTLEVLD HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA