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The map label for this gene is trpD [H]

Identifier: 156976808

GI number: 156976808

Start: 788614

End: 789567

Strand: Direct

Name: trpD [H]

Synonym: VIBHAR_05584

Alternate gene names: 156976808

Gene position: 788614-789567 (Clockwise)

Preceding gene: 156976807

Following gene: 156976809

Centisome position: 35.78

GC content: 47.8

Gene sequence:

>954_bases
ATGAGCAGCATTTTGGAATGTATTAGAACAGTCGGTCGTGGCGAACGTGGTAGAAAACCACTGAACTTTGACCAAGCGTT
TCGAGTTATGGATGAATACCTAAACGGTGAGTGCGACGACGATCAGATGGCAATGTTATTGATGCTGATCCGCGTACAGA
ACGAGACTCAACAAGAAATTGCTGGCTTTGTTAAAGCATTCCAATCCCGCATGCCAGCTATTGGTGCAGACATTGATTGG
CCATGTTACGCAGGCAAACGTGAAGCGGCAGGTCAACCTTGGCACCTGTTGGCAGCGAAGATCCTCGCCGATAATGGTCA
TAAAGTGTTGATGCATGGTTATCACGACCGTCAATCTGGTCGTTTACACGCAGAAGATTACCTCGACAAGTTTGATATCA
ACAAAGCGGAATCAGCAGAAGACGCGAAGCGTGTGTTAGAAACACAAAACATTGTGTATCTGCCGCTGAGTTCGTTTGCT
CCTCAAGCAGAAACCATGATTGGTTGGAAGAATCGTTATGGGCTTAGAACGCCGATTAATACCGTGGTTCGAGCACTGAA
CCCGGGGCAGGCGACCGTCGGTATTCGTGGTAGCTTCCATCCTGGATTCCAACAACTTCATGCTGAAGTCGAATATGAGA
TTGGTCAAACCGCTCACGCCGTTGTGTCATTTAAAGGGCAATCGGGTGAGTCAGAGTACAACCCGAAAGTAAGCCAAACG
GTATGGTTAAGCCAAACAAGCGGCGTGACATCGCACTACTGGACGGAGCAAATGCTGTCTGAGGTGCCAATGCCAGTAAA
TTGCCCGTTTGGTACGTCAGAAGATGACATGAACCAAATGGCGAATACGGTTTTAGCGACGATGACAGTGGTTCTATTTG
CACAAATGCACGACAGAGAAAAAGCATTTGAACGCGCCTTCTCTTACTGGCAAGCCTATTGCGGCCAGCAATAA

Upstream 100 bases:

>100_bases
TTAAAGGCGTGAGCCCAGCATTGATTGTGATGGGAGAAGTTGTCAAACTGCGCGAACAACTAATAGAAACCGTACAGTCA
GTGACGGAATACGAGGGAAT

Downstream 100 bases:

>100_bases
CGTACTATTGTCAATGAACATAAAACCAACGACGCAAAGTTGTTGAATCTGAATCCATTATCTATTGTTTTAAGAAGGTA
AAAGATCCTAGCTCACCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSSILECIRTVGRGERGRKPLNFDQAFRVMDEYLNGECDDDQMAMLLMLIRVQNETQQEIAGFVKAFQSRMPAIGADIDW
PCYAGKREAAGQPWHLLAAKILADNGHKVLMHGYHDRQSGRLHAEDYLDKFDINKAESAEDAKRVLETQNIVYLPLSSFA
PQAETMIGWKNRYGLRTPINTVVRALNPGQATVGIRGSFHPGFQQLHAEVEYEIGQTAHAVVSFKGQSGESEYNPKVSQT
VWLSQTSGVTSHYWTEQMLSEVPMPVNCPFGTSEDDMNQMANTVLATMTVVLFAQMHDREKAFERAFSYWQAYCGQQ

Sequences:

>Translated_317_residues
MSSILECIRTVGRGERGRKPLNFDQAFRVMDEYLNGECDDDQMAMLLMLIRVQNETQQEIAGFVKAFQSRMPAIGADIDW
PCYAGKREAAGQPWHLLAAKILADNGHKVLMHGYHDRQSGRLHAEDYLDKFDINKAESAEDAKRVLETQNIVYLPLSSFA
PQAETMIGWKNRYGLRTPINTVVRALNPGQATVGIRGSFHPGFQQLHAEVEYEIGQTAHAVVSFKGQSGESEYNPKVSQT
VWLSQTSGVTSHYWTEQMLSEVPMPVNCPFGTSEDDMNQMANTVLATMTVVLFAQMHDREKAFERAFSYWQAYCGQQ
>Mature_316_residues
SSILECIRTVGRGERGRKPLNFDQAFRVMDEYLNGECDDDQMAMLLMLIRVQNETQQEIAGFVKAFQSRMPAIGADIDWP
CYAGKREAAGQPWHLLAAKILADNGHKVLMHGYHDRQSGRLHAEDYLDKFDINKAESAEDAKRVLETQNIVYLPLSSFAP
QAETMIGWKNRYGLRTPINTVVRALNPGQATVGIRGSFHPGFQQLHAEVEYEIGQTAHAVVSFKGQSGESEYNPKVSQTV
WLSQTSGVTSHYWTEQMLSEVPMPVNCPFGTSEDDMNQMANTVLATMTVVLFAQMHDREKAFERAFSYWQAYCGQQ

Specific function: Unknown

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787019, Length=256, Percent_Identity=25.78125, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005940
- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072 [H]

Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]

EC number: =2.4.2.18 [H]

Molecular weight: Translated: 35737; Mature: 35606

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSILECIRTVGRGERGRKPLNFDQAFRVMDEYLNGECDDDQMAMLLMLIRVQNETQQEI
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHH
AGFVKAFQSRMPAIGADIDWPCYAGKREAAGQPWHLLAAKILADNGHKVLMHGYHDRQSG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC
RLHAEDYLDKFDINKAESAEDAKRVLETQNIVYLPLSSFAPQAETMIGWKNRYGLRTPIN
CCCHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCCCCHH
TVVRALNPGQATVGIRGSFHPGFQQLHAEVEYEIGQTAHAVVSFKGQSGESEYNPKVSQT
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHE
VWLSQTSGVTSHYWTEQMLSEVPMPVNCPFGTSEDDMNQMANTVLATMTVVLFAQMHDRE
EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAFERAFSYWQAYCGQQ
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSILECIRTVGRGERGRKPLNFDQAFRVMDEYLNGECDDDQMAMLLMLIRVQNETQQEI
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHH
AGFVKAFQSRMPAIGADIDWPCYAGKREAAGQPWHLLAAKILADNGHKVLMHGYHDRQSG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC
RLHAEDYLDKFDINKAESAEDAKRVLETQNIVYLPLSSFAPQAETMIGWKNRYGLRTPIN
CCCHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCCCCHH
TVVRALNPGQATVGIRGSFHPGFQQLHAEVEYEIGQTAHAVVSFKGQSGESEYNPKVSQT
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHE
VWLSQTSGVTSHYWTEQMLSEVPMPVNCPFGTSEDDMNQMANTVLATMTVVLFAQMHDRE
EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAFERAFSYWQAYCGQQ
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10369778 [H]