| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976799
Identifier: 156976799
GI number: 156976799
Start: 777281
End: 777727
Strand: Reverse
Name: 156976799
Synonym: VIBHAR_05575
Alternate gene names: NA
Gene position: 777727-777281 (Counterclockwise)
Preceding gene: 156976800
Following gene: 156976794
Centisome position: 35.29
GC content: 44.97
Gene sequence:
>447_bases ATGAAATTTATGACATTTTCTATTCTGGCTCTATCGACAATGGCAGCGGCTGTACAAGCAGAGCAACAATTGGCTCAGCA ACCTACACCTGAACTGTTTGTCGCATCTGATGCCGTGCAAATTAACGGCCAAGATTACCGTAAGCTTTCTGTTGATAGCC TTGCCGAAGCGGCAGAGCTACACGCTGGTGATGAAGTGTTTAAGAATGCGTTTAGTAACGTATCTAAAGCAACGGGCCTT ATCTTTGTTACGGTGAAAAACCCAGCCGATGCTAAGGCAGTAGCTAAAGAGCTCAAACTTGACGTCGTCTTTGCACAGGG TGAATCAGCCGTATTCAAAGCTGCGGAAGGTCAAGATCTACTGGGTATCAGCGATTACCTAAATGCTGACAGTCGCGTAA AAGCGTCTAAAATTGAACTAAACAGCGGTAAATACCGTGCACAATAA
Upstream 100 bases:
>100_bases TTCTTCAGCTATCTATGATGTACCGATGGCTAACAACGCAAAACCAGGTGTTATCAAAAACTGGTCTATGCGTATCTTCG GTCACTAAGGAGTCATTCAC
Downstream 100 bases:
>100_bases TTCTCTAACAAGAGAAGTTGGCCTATAAAAAATGCCTCAGCACATGCTGAGGCATTTTCTTTTCGCTTACGAGAAGCGGA CAGTTTTAATCTATTGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKFMTFSILALSTMAAAVQAEQQLAQQPTPELFVASDAVQINGQDYRKLSVDSLAEAAELHAGDEVFKNAFSNVSKATGL IFVTVKNPADAKAVAKELKLDVVFAQGESAVFKAAEGQDLLGISDYLNADSRVKASKIELNSGKYRAQ
Sequences:
>Translated_148_residues MKFMTFSILALSTMAAAVQAEQQLAQQPTPELFVASDAVQINGQDYRKLSVDSLAEAAELHAGDEVFKNAFSNVSKATGL IFVTVKNPADAKAVAKELKLDVVFAQGESAVFKAAEGQDLLGISDYLNADSRVKASKIELNSGKYRAQ >Mature_148_residues MKFMTFSILALSTMAAAVQAEQQLAQQPTPELFVASDAVQINGQDYRKLSVDSLAEAAELHAGDEVFKNAFSNVSKATGL IFVTVKNPADAKAVAKELKLDVVFAQGESAVFKAAEGQDLLGISDYLNADSRVKASKIELNSGKYRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15843; Mature: 15843
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFMTFSILALSTMAAAVQAEQQLAQQPTPELFVASDAVQINGQDYRKLSVDSLAEAAEL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCEEECHHHHHHHHHH HAGDEVFKNAFSNVSKATGLIFVTVKNPADAKAVAKELKLDVVFAQGESAVFKAAEGQDL CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHEEEEEEECCCCEEEEECCCCCC LGISDYLNADSRVKASKIELNSGKYRAQ CCHHHHCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MKFMTFSILALSTMAAAVQAEQQLAQQPTPELFVASDAVQINGQDYRKLSVDSLAEAAEL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCEEECHHHHHHHHHH HAGDEVFKNAFSNVSKATGLIFVTVKNPADAKAVAKELKLDVVFAQGESAVFKAAEGQDL CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHEEEEEEECCCCEEEEECCCCCC LGISDYLNADSRVKASKIELNSGKYRAQ CCHHHHCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA