| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976794
Identifier: 156976794
GI number: 156976794
Start: 770105
End: 771286
Strand: Reverse
Name: 156976794
Synonym: VIBHAR_05569
Alternate gene names: NA
Gene position: 771286-770105 (Counterclockwise)
Preceding gene: 156976799
Following gene: 156976793
Centisome position: 34.99
GC content: 45.52
Gene sequence:
>1182_bases ATGAAAAAATTAGCGCTTGTAGCGGCAGTGGGTTTGGCATTATCTGGTTGTGGTGGTTCTGGAGATGGTGGTAGTTCTTC ACCTCAACCGGCGGCAAAACCAAGCTCTGCGATTGGTACGGTTGAATCAGTCAACGAAGCGAAAAGCACCATTACAGTAA ACGGCTATACCTATCGTGTTTCTGAAGTCATGTATGGTTCAAAAGAAACGAATCTAGGTGCTGTTCAGCCAAACATGATG GTTCAAGTTGGTTCTGGAACAGAGAAATCGGCAGAGGAACCAGTAGTCGTTACGCTAGAGCCAACCATGACTGGTACAGT GACGGCAATTGATCATGTAAACAAAACCTTCACTGTTAACGGTGTCGAACTTCATTTTGAAGGTTTGAGTAATGAAATCG ACCAAGGCGATTGGGTTATGGTGTCCTCACTGCCAACCGCTGATGCTGGCTACAAAGTGCTATCCGTTGTGAAGTTTGAC TTCGACTACAACGGTCCTGATGAAATCGAAGGCCGTATCTCAAGCATTGATGCAAATAACAGCACCTTCAAACTGGGTGC AAACACGACCGTTTCTTACGACCGTGTTGATGGCTTAGAAGTTGGTCAATGGGTTGAAGCTGAAGGCTCAATGCAAGGCG ACCTGTTTGTAGCAACCGAAGTAGAAGTTGAAAACTATGACAGCCTTGTTGGCGATAATGATGTGGAAGGCATCGTGACA TGGGTTGCGAACGATTACAGCCAATTCTCATTAAACTACCGTGGTAACTTCGCTGTCGATAACGCAACACGCTTTGAAGA TGGTACCAAAGCAGATCTTAAACAAGGCCAAGAAGTTGAAGTGACATCAGTAATGAAAAATGGTGTTCGCACAGCGACAA ACGTTGAAATCGACGGCCCTGATTTTGATGGCGACCACGACAGCAACTGGCAAGGTAAAGAGTTTGAATGTGAAGGTGTG GTATCCAACTACGATGTCAACACTGAGACTTTCCAAGTAACGCGTTGTGAGAATGACGCTGACCAAACTATGTCGAACAA CACGGTTGTAATTGACGCTCAAACTCGTTTCGAAGGTTTAAGTCAACACAACCTAAATGGTTCTCGAGTTGAAGTGGAAG GTGTGATCATCAACAACCAAAACATCGCGCGTGAAGTGGAAGCAGAAGGCCACGACGACTAA
Upstream 100 bases:
>100_bases AATATTTTCATAAGCTCACGTTTCTTCACGAACACTTCACGATACGCGTCATAAGATACAACCAAATTCATAAATAAGCT TTCAAAAATAGGTCGATATC
Downstream 100 bases:
>100_bases CGCAATGTAAATACACGCAAATACTTAAGAAGCATCACAGTTTGGTGCTTCTTTTCCTTCCGTATCGACTTTTCTTCTAT CCTCTTTAAAACAGATACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKKLALVAAVGLALSGCGGSGDGGSSSPQPAAKPSSAIGTVESVNEAKSTITVNGYTYRVSEVMYGSKETNLGAVQPNMM VQVGSGTEKSAEEPVVVTLEPTMTGTVTAIDHVNKTFTVNGVELHFEGLSNEIDQGDWVMVSSLPTADAGYKVLSVVKFD FDYNGPDEIEGRISSIDANNSTFKLGANTTVSYDRVDGLEVGQWVEAEGSMQGDLFVATEVEVENYDSLVGDNDVEGIVT WVANDYSQFSLNYRGNFAVDNATRFEDGTKADLKQGQEVEVTSVMKNGVRTATNVEIDGPDFDGDHDSNWQGKEFECEGV VSNYDVNTETFQVTRCENDADQTMSNNTVVIDAQTRFEGLSQHNLNGSRVEVEGVIINNQNIAREVEAEGHDD
Sequences:
>Translated_393_residues MKKLALVAAVGLALSGCGGSGDGGSSSPQPAAKPSSAIGTVESVNEAKSTITVNGYTYRVSEVMYGSKETNLGAVQPNMM VQVGSGTEKSAEEPVVVTLEPTMTGTVTAIDHVNKTFTVNGVELHFEGLSNEIDQGDWVMVSSLPTADAGYKVLSVVKFD FDYNGPDEIEGRISSIDANNSTFKLGANTTVSYDRVDGLEVGQWVEAEGSMQGDLFVATEVEVENYDSLVGDNDVEGIVT WVANDYSQFSLNYRGNFAVDNATRFEDGTKADLKQGQEVEVTSVMKNGVRTATNVEIDGPDFDGDHDSNWQGKEFECEGV VSNYDVNTETFQVTRCENDADQTMSNNTVVIDAQTRFEGLSQHNLNGSRVEVEGVIINNQNIAREVEAEGHDD >Mature_393_residues MKKLALVAAVGLALSGCGGSGDGGSSSPQPAAKPSSAIGTVESVNEAKSTITVNGYTYRVSEVMYGSKETNLGAVQPNMM VQVGSGTEKSAEEPVVVTLEPTMTGTVTAIDHVNKTFTVNGVELHFEGLSNEIDQGDWVMVSSLPTADAGYKVLSVVKFD FDYNGPDEIEGRISSIDANNSTFKLGANTTVSYDRVDGLEVGQWVEAEGSMQGDLFVATEVEVENYDSLVGDNDVEGIVT WVANDYSQFSLNYRGNFAVDNATRFEDGTKADLKQGQEVEVTSVMKNGVRTATNVEIDGPDFDGDHDSNWQGKEFECEGV VSNYDVNTETFQVTRCENDADQTMSNNTVVIDAQTRFEGLSQHNLNGSRVEVEGVIINNQNIAREVEAEGHDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42202; Mature: 42202
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLALVAAVGLALSGCGGSGDGGSSSPQPAAKPSSAIGTVESVNEAKSTITVNGYTYRV CCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCEEEECCEEEEE SEVMYGSKETNLGAVQPNMMVQVGSGTEKSAEEPVVVTLEPTMTGTVTAIDHVNKTFTVN EEEEECCCCCCCCEECCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEC GVELHFEGLSNEIDQGDWVMVSSLPTADAGYKVLSVVKFDFDYNGPDEIEGRISSIDANN CEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHCCEEEEECCCC STFKLGANTTVSYDRVDGLEVGQWVEAEGSMQGDLFVATEVEVENYDSLVGDNDVEGIVT CEEEECCCCEEEECCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCHHCCCCCCCEEEE WVANDYSQFSLNYRGNFAVDNATRFEDGTKADLKQGQEVEVTSVMKNGVRTATNVEIDGP EEECCCEEEEEEECCCEEECCCCCCCCCCHHHHHCCCEEEHHHHHHCCCCEEEEEEECCC DFDGDHDSNWQGKEFECEGVVSNYDVNTETFQVTRCENDADQTMSNNTVVIDAQTRFEGL CCCCCCCCCCCCCEEEECEEEECCCCCCCEEEEEECCCCHHHHCCCCEEEEEEHHHHCCC SQHNLNGSRVEVEGVIINNQNIAREVEAEGHDD HHCCCCCCEEEEEEEEECCCCCEEECCCCCCCC >Mature Secondary Structure MKKLALVAAVGLALSGCGGSGDGGSSSPQPAAKPSSAIGTVESVNEAKSTITVNGYTYRV CCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCEEEECCEEEEE SEVMYGSKETNLGAVQPNMMVQVGSGTEKSAEEPVVVTLEPTMTGTVTAIDHVNKTFTVN EEEEECCCCCCCCEECCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEC GVELHFEGLSNEIDQGDWVMVSSLPTADAGYKVLSVVKFDFDYNGPDEIEGRISSIDANN CEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHCCEEEEECCCC STFKLGANTTVSYDRVDGLEVGQWVEAEGSMQGDLFVATEVEVENYDSLVGDNDVEGIVT CEEEECCCCEEEECCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCHHCCCCCCCEEEE WVANDYSQFSLNYRGNFAVDNATRFEDGTKADLKQGQEVEVTSVMKNGVRTATNVEIDGP EEECCCEEEEEEECCCEEECCCCCCCCCCHHHHHCCCEEEHHHHHHCCCCEEEEEEECCC DFDGDHDSNWQGKEFECEGVVSNYDVNTETFQVTRCENDADQTMSNNTVVIDAQTRFEGL CCCCCCCCCCCCCEEEECEEEECCCCCCCEEEEEECCCCHHHHCCCCEEEEEEHHHHCCC SQHNLNGSRVEVEGVIINNQNIAREVEAEGHDD HHCCCCCCEEEEEEEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA