| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976793
Identifier: 156976793
GI number: 156976793
Start: 769647
End: 769982
Strand: Reverse
Name: 156976793
Synonym: VIBHAR_05568
Alternate gene names: NA
Gene position: 769982-769647 (Counterclockwise)
Preceding gene: 156976794
Following gene: 156976791
Centisome position: 34.94
GC content: 44.64
Gene sequence:
>336_bases ATGCGTAAAATAACACTACCTCTAATTATACTTTTCGGTGCTTGTGTTTCAGCAAGCAGCTTCGCTGCGAAAAATGCTCA GGATGCACCAGAACGACTAGAGTCTTTTGAGTGTACAGGCCTTGTAAACAGTTACGACGCAAACTCTCGAACTTTCGTAC TGGCTTGCCAAAACGAACACGGACCAGACTTCCAAACCAAAACTGTCGTGATTGATAGCAATACTCAGATTAACGGGGTG CAAGAAGCGAACTTAGACGGGGCAACCATCGAGGTTGATGGCGTGGTTATGAATGACCAAAATATCGCAAGAGAAATTGA GCTCGCTAACGACTAA
Upstream 100 bases:
>100_bases ACTTAAGAAGCATCACAGTTTGGTGCTTCTTTTCCTTCCGTATCGACTTTTCTTCTATCCTCTTTAAAACAGATACGTAT GACCAAATGAGGGATTAATA
Downstream 100 bases:
>100_bases ACTTCCGAAAATACAGCAGAAACTCTCAAGTGTCGCGTCGGCGGCACTTTTCTTTTCCTGCAAACTCACCGCTCTCAGTT ACACTTAGTTAATGTTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MRKITLPLIILFGACVSASSFAAKNAQDAPERLESFECTGLVNSYDANSRTFVLACQNEHGPDFQTKTVVIDSNTQINGV QEANLDGATIEVDGVVMNDQNIAREIELAND
Sequences:
>Translated_111_residues MRKITLPLIILFGACVSASSFAAKNAQDAPERLESFECTGLVNSYDANSRTFVLACQNEHGPDFQTKTVVIDSNTQINGV QEANLDGATIEVDGVVMNDQNIAREIELAND >Mature_111_residues MRKITLPLIILFGACVSASSFAAKNAQDAPERLESFECTGLVNSYDANSRTFVLACQNEHGPDFQTKTVVIDSNTQINGV QEANLDGATIEVDGVVMNDQNIAREIELAND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12005; Mature: 12005
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKITLPLIILFGACVSASSFAAKNAQDAPERLESFECTGLVNSYDANSRTFVLACQNEH CCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCEEEECCEECCCCCCCEEEEEECCCC GPDFQTKTVVIDSNTQINGVQEANLDGATIEVDGVVMNDQNIAREIELAND CCCCCEEEEEEECCCCCCCEEECCCCCCEEEEEEEEECCCCCEEEEEECCC >Mature Secondary Structure MRKITLPLIILFGACVSASSFAAKNAQDAPERLESFECTGLVNSYDANSRTFVLACQNEH CCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCEEEECCEECCCCCCCEEEEEECCCC GPDFQTKTVVIDSNTQINGVQEANLDGATIEVDGVVMNDQNIAREIELAND CCCCCEEEEEEECCCCCCCEEECCCCCCEEEEEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA