| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is artI [H]
Identifier: 156976754
GI number: 156976754
Start: 736716
End: 737459
Strand: Direct
Name: artI [H]
Synonym: VIBHAR_05529
Alternate gene names: 156976754
Gene position: 736716-737459 (Clockwise)
Preceding gene: 156976753
Following gene: 156976755
Centisome position: 33.43
GC content: 44.76
Gene sequence:
>744_bases ATGAAAAAGATTTTACTAGCTTCACTAATCGGCCTTTCTTCTGCAACCATGGCAGCGAACGCAGCAGCACAAGAAGAGAT CAAATTCGCGATGGAAGCGACTTACGCACCGTTCGAATACATGGATGAAAACAACCAAATCCAAGGTTTTGACGTGGATC TGGCGAACGCACTATGTAAAGAAATGGAAGCACAATGTACCTTCCACAACCAATCTTTTGACAGCCTGATCCCTGCATTA AAATTCAAGCGTTACGATGCGGCTATCTCTGCAATGGATATTACTGACGCGCGTTTGGAGCAAGTGAACTTTTCTGCCCC TTACTACGACAACTCAGCAGCGTTTGTTTCTATCAAAGAAAAAGTGGCCGATCAAAAAGCACTAGAAGGTAAGCGTGTTG GTGTTCAAAACGGTTCAACACACCAAAGCTACCTGATCGAGCAAATGCCAGGTGTAACAGCGGTTCCTTACTCAAGCTAC CAAGACGCATTCATCGATATGAAGAATGGCCGTATTGATTCTGTATTCGGTGACACAGCAGTTGTAGCGGAATGGTTCAA GAAAGAAAACAACCTAGCGTACGTGGGCGAGCACGTTACTAACCCTAAATACTTCGGTAACGGTTTCGGTATCGCAGTAA ACAAAGGTAACGACGAGCTAGTGAACAAGCTGAACACGGCACTGAAAACAGTGAAAGCGAACGGCGAATACGACGTAATC TACAACAAGTACTTCGGTAAGTAA
Upstream 100 bases:
>100_bases TAAATCACTAAATTACGTTTTTTAAAGTTCAGTCTATTTAACAGATAAGCTCGGCTGTCATTGCGAGTGTCAGCCCACTA AGTACACACGGAGTATTGCA
Downstream 100 bases:
>100_bases TATGGCACTAACGGGTTACTCTTTATCGCTTGTTCAAGCTAGTTGGATGACTGTCCAGCTAGCATTCACAAGCCTTTTAG TCGGTTTGATTCTGGCAGTG
Product: ABC amino acid transporter periplasmic ligand binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKKILLASLIGLSSATMAANAAAQEEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCKEMEAQCTFHNQSFDSLIPAL KFKRYDAAISAMDITDARLEQVNFSAPYYDNSAAFVSIKEKVADQKALEGKRVGVQNGSTHQSYLIEQMPGVTAVPYSSY QDAFIDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNPKYFGNGFGIAVNKGNDELVNKLNTALKTVKANGEYDVI YNKYFGK
Sequences:
>Translated_247_residues MKKILLASLIGLSSATMAANAAAQEEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCKEMEAQCTFHNQSFDSLIPAL KFKRYDAAISAMDITDARLEQVNFSAPYYDNSAAFVSIKEKVADQKALEGKRVGVQNGSTHQSYLIEQMPGVTAVPYSSY QDAFIDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNPKYFGNGFGIAVNKGNDELVNKLNTALKTVKANGEYDVI YNKYFGK >Mature_247_residues MKKILLASLIGLSSATMAANAAAQEEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCKEMEAQCTFHNQSFDSLIPAL KFKRYDAAISAMDITDARLEQVNFSAPYYDNSAAFVSIKEKVADQKALEGKRVGVQNGSTHQSYLIEQMPGVTAVPYSSY QDAFIDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNPKYFGNGFGIAVNKGNDELVNKLNTALKTVKANGEYDVI YNKYFGK
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787088, Length=247, Percent_Identity=58.2995951417004, Blast_Score=300, Evalue=4e-83, Organism=Escherichia coli, GI1787085, Length=245, Percent_Identity=55.1020408163265, Blast_Score=278, Evalue=2e-76, Organism=Escherichia coli, GI1788649, Length=254, Percent_Identity=37.007874015748, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1788648, Length=228, Percent_Identity=34.6491228070175, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1787031, Length=251, Percent_Identity=33.0677290836653, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1788228, Length=223, Percent_Identity=28.6995515695067, Blast_Score=111, Evalue=4e-26,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27337; Mature: 27337
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLASLIGLSSATMAANAAAQEEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCK CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHH EMEAQCTFHNQSFDSLIPALKFKRYDAAISAMDITDARLEQVNFSAPYYDNSAAFVSIKE HHHHHEEECCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCCCCEECCCEEEEEEHH KVADQKALEGKRVGVQNGSTHQSYLIEQMPGVTAVPYSSYQDAFIDMKNGRIDSVFGDTA HHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCEEECCCCEECCCCCCHH VVAEWFKKENNLAYVGEHVTNPKYFGNGFGIAVNKGNDELVNKLNTALKTVKANGEYDVI HHHHHHHCCCCEEEEECCCCCCCEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE YNKYFGK ECCCCCC >Mature Secondary Structure MKKILLASLIGLSSATMAANAAAQEEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCK CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHH EMEAQCTFHNQSFDSLIPALKFKRYDAAISAMDITDARLEQVNFSAPYYDNSAAFVSIKE HHHHHEEECCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCCCCEECCCEEEEEEHH KVADQKALEGKRVGVQNGSTHQSYLIEQMPGVTAVPYSSYQDAFIDMKNGRIDSVFGDTA HHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCEEECCCCEECCCCCCHH VVAEWFKKENNLAYVGEHVTNPKYFGNGFGIAVNKGNDELVNKLNTALKTVKANGEYDVI HHHHHHHCCCCEEEEECCCCCCCEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE YNKYFGK ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]