| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976749
Identifier: 156976749
GI number: 156976749
Start: 733805
End: 734176
Strand: Reverse
Name: 156976749
Synonym: VIBHAR_05524
Alternate gene names: NA
Gene position: 734176-733805 (Counterclockwise)
Preceding gene: 156976750
Following gene: 156976748
Centisome position: 33.31
GC content: 43.28
Gene sequence:
>372_bases ATGAAATATTTAGCGCCTGCACTTGCCGTTTCTTTACCTCTATTTTTAGTAGGCTGTCAAACGACAAACACCTTATATGA TTGGGGCGGTTACGATGAGGGACTTTATGAGTACTATCATGACCCAGTTGAAGCCAAAGAATTTCCGGTAGCTCTGGAAT CACATCTTGCTGAGCTAGAGGAAAATGGACAAAAACCAGCGCCAGGACTATACGCAGAAGTCGGTACCTTTAACCTGAAA TCAGGCGATACAACTAAGGCTGTAGCTTTTTATAGGAAAGAGGCGGAAGTTTGGCCGGAAAGTGCACCATTAATGAATGC GCTTATTCAAAACTTGGAGAGACAAGATCACGAAGCTGGGGTAAACAATTGA
Upstream 100 bases:
>100_bases TTCCTGGTACTCACATTATTGAGTTCTACAAAGATGGTTCACTAATATCATCACAAAAAATCTATGTCGGTGATGGTGTA ACAAAAGAGGTAATTGTTGA
Downstream 100 bases:
>100_bases TGAATTACGTTAAGACTCTATTCTTGATCGCGCTTGCATCTACATTATCCGCATGTCAAACAACTAAAGTAGAACGACAA ACTGGTTTTGAGGATGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELEENGQKPAPGLYAEVGTFNLK SGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAGVNN
Sequences:
>Translated_123_residues MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELEENGQKPAPGLYAEVGTFNLK SGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAGVNN >Mature_123_residues MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELEENGQKPAPGLYAEVGTFNLK SGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAGVNN
Specific function: Unknown
COG id: COG4259
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13681; Mature: 13681
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELE CCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCCCCHHCCHHHHHHHHHHH ENGQKPAPGLYAEVGTFNLKSGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAG HCCCCCCCCCEECCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC VNN CCC >Mature Secondary Structure MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELE CCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCCCCHHCCHHHHHHHHHHH ENGQKPAPGLYAEVGTFNLKSGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAG HCCCCCCCCCEECCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC VNN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA