Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976749

Identifier: 156976749

GI number: 156976749

Start: 733805

End: 734176

Strand: Reverse

Name: 156976749

Synonym: VIBHAR_05524

Alternate gene names: NA

Gene position: 734176-733805 (Counterclockwise)

Preceding gene: 156976750

Following gene: 156976748

Centisome position: 33.31

GC content: 43.28

Gene sequence:

>372_bases
ATGAAATATTTAGCGCCTGCACTTGCCGTTTCTTTACCTCTATTTTTAGTAGGCTGTCAAACGACAAACACCTTATATGA
TTGGGGCGGTTACGATGAGGGACTTTATGAGTACTATCATGACCCAGTTGAAGCCAAAGAATTTCCGGTAGCTCTGGAAT
CACATCTTGCTGAGCTAGAGGAAAATGGACAAAAACCAGCGCCAGGACTATACGCAGAAGTCGGTACCTTTAACCTGAAA
TCAGGCGATACAACTAAGGCTGTAGCTTTTTATAGGAAAGAGGCGGAAGTTTGGCCGGAAAGTGCACCATTAATGAATGC
GCTTATTCAAAACTTGGAGAGACAAGATCACGAAGCTGGGGTAAACAATTGA

Upstream 100 bases:

>100_bases
TTCCTGGTACTCACATTATTGAGTTCTACAAAGATGGTTCACTAATATCATCACAAAAAATCTATGTCGGTGATGGTGTA
ACAAAAGAGGTAATTGTTGA

Downstream 100 bases:

>100_bases
TGAATTACGTTAAGACTCTATTCTTGATCGCGCTTGCATCTACATTATCCGCATGTCAAACAACTAAAGTAGAACGACAA
ACTGGTTTTGAGGATGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELEENGQKPAPGLYAEVGTFNLK
SGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAGVNN

Sequences:

>Translated_123_residues
MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELEENGQKPAPGLYAEVGTFNLK
SGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAGVNN
>Mature_123_residues
MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELEENGQKPAPGLYAEVGTFNLK
SGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAGVNN

Specific function: Unknown

COG id: COG4259

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13681; Mature: 13681

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELE
CCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCCCCHHCCHHHHHHHHHHH
ENGQKPAPGLYAEVGTFNLKSGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAG
HCCCCCCCCCEECCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
VNN
CCC
>Mature Secondary Structure
MKYLAPALAVSLPLFLVGCQTTNTLYDWGGYDEGLYEYYHDPVEAKEFPVALESHLAELE
CCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCCCCHHCCHHHHHHHHHHH
ENGQKPAPGLYAEVGTFNLKSGDTTKAVAFYRKEAEVWPESAPLMNALIQNLERQDHEAG
HCCCCCCCCCEECCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
VNN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA