| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976743
Identifier: 156976743
GI number: 156976743
Start: 728234
End: 730465
Strand: Reverse
Name: 156976743
Synonym: VIBHAR_05518
Alternate gene names: NA
Gene position: 730465-728234 (Counterclockwise)
Preceding gene: 156976745
Following gene: 156976742
Centisome position: 33.14
GC content: 45.83
Gene sequence:
>2232_bases ATGAAGCCATATCGCTCTGCGCTGCTTGCGCTGGGGCCTTTGAGCCTGTTGTTTACACCTGTGACATGGTCAGCCACGGC AATCGTTTTACCGGGGCTGCATGAACAAGGTATTGATCTACGAGATGCACCGGTTTCTGCGGCGGCTGCGCTTGAGTGGG AACTGGTTAATGCCGATGTCGTGTTTGGCGCATATGAAAATAAAAGCGATAACGAACGCGTAAATGCGATTGGGTATATG TACAACCAAAAGCTCGAACTTAACTCGGGTTGGCTCGAAAACGATATACGTAACCAAGCAGAAATAAATAACATCGATTA TGAAGATTTTTTTCTTCATTTTTCGGAAGACACCATCATCGCAGAGATAGACTCTAGCCATGGTGAAAATACCTTACTCA ATCGAAAACCGATGATTGTCGGTTATACGGCTAGTGCCGACCACGCAGGCTTTTGGTTATATCAACAACCACCATGGGAC GCTGACGTCTTTGGACAGACGAATAATGGTGGTGCTCTCTATGTTTATCACTCAGAGAAGTTCGACCGCTTAGCATTTAC GTTCTCCCAGTTTGCTCAAGGTGGCCGCTTTACGATTGAATACCCTTCTGCCATAGACTCATTTGGTCAGGTATCGCAGT GGAAGCCGTTTGATATTAATAAAGATAAAACGCTGAACATGACCAAAAACCAAACGGTAAACTGGTCCGTTCCTTCGGAT TGGGTTCGCGCTACAACGCACTATGGCAGCGGAAAAACCTATGGCGGCGGTCAGTACTTTGGCTCCACCTTTTTACGCGA TGGTGGCCGTCTTTACGTTGCGAAAATTACTTGGCATGACGAAAACATCGAGAATCGCCCTCGTCTAAAAGAAGTAAAGC TCAAAAACGGCTTCCAAACCGTTAAGTTGACCGACGCACCAAAGGCAACACCTGAAGGTCAAACCATTCAACGCTGGCGT AAGATACGTGGCTTCGACAAATCCGCAGACCTAAACCAAGATAATTATCTTTCTTGGAATGAATACACAAACCGTTCGAA TAAGAATGCAACGGCACGATTTCGTTGGGAGTCACGTGTTATTCCATTTGGTCGCATGTGGAACCAAACCTCTTCTTGGG CATTAACCAATCTTGGTAACCCCGAGTTTGCCAACGCGATGCATCACTATTACCAAGCTGAATGGGCGAAACAAGGTTTA AACGGTGCGTACAACGACGATACTAATAAGTTACTCGGAGCAAATCAGTTCTACGTTTATTCCGGTGGTACGGTGGATGA ACTTGGTTTGGTGGCAGGAAGCCAAGCTGCTGACGATGCTTACAAAGCACAATTCTCGGCGTTCTTAAACAAACTGGCAA CGCTGGATGCGGATGCGTTAATTGGTCTCAACATAGACACGGCAAACCTATTCGGCCGTAATGGACAAAACCACTTAGTT GAAGCTGGTTCTCTATATTTACGCGAGCATTACCTTTTCCCTTCTACTGGCTTTAGTGGCTATGCTGGCTTAGCTAAGTT TTGGGATAACTCTGCACTCGCCAAAGCGGGTCAGAAAGTGATTTATCAAGCAACCACGCGTTATGGTCGAGTTCAATACT TTGGCAACACTGAAGATAACTGGAAGCAAGACCAATACTCTACACTGGCGGCGTTTTACTTAAATCATCACCCTGAGCGT AGCTTTTTTAATCAATGGAACAGTAGCTACTTATATGGCAGTAACAACACTACTGCCGAAAACTTCTGGAAAGCTGGCGT ACCAAAAAACATTGCTTATCAACCAAGTGCGTTACTCGCCGTCGATTTGGGAGAGCCCGCCAATCTAGTGCCTGAAGGGG CTGCAGCGATGCCGCTTATGTTGTCCACCAGCACACCGCCAAAGTCCGATTATACAATCATTGGCGATTCCACCATGAAT AAAGTTGAGCATGTAGGCTTACCTGGAGACATTACTTACCTTTATCCCACTTATATATACTTTGCTTATCGTTCGAGCAC AGATATCGTCGCTCAAGGTCCATCAGAAATGGTGTTAGCACGTGAGTTTACCAACGGGCGTGTGCTATATCGCACCGACT TCTTTGGTAAAAACGCAAACTATTTCTCCGCGCCTAAAATCACCATTACGCTTGACAAGCCAATGAGACCCGTAGACAAA GACGGTAATATTGGTGGCTACGTTTCGCACATTGAAATCGGCGGTTATGAGGGAGTGTTCTTACTTTATTGA
Upstream 100 bases:
>100_bases TTCTAGTACTTTCTTGAATTGGTCTGATCAATCGCCAATACTTTTTCTAATTAGACTCGCTATCTAATTAATCGAAGTTT TTGATTGGGACAACTCAATA
Downstream 100 bases:
>100_bases ATTGCAGCATCAATTGAAATTTGTCACTCACACCTTCTTTCTATAGTGCCCCAGATTCATTTAAGTACAACTTTGTACTT TGAACGACACAATGGGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MKPYRSALLALGPLSLLFTPVTWSATAIVLPGLHEQGIDLRDAPVSAAAALEWELVNADVVFGAYENKSDNERVNAIGYM YNQKLELNSGWLENDIRNQAEINNIDYEDFFLHFSEDTIIAEIDSSHGENTLLNRKPMIVGYTASADHAGFWLYQQPPWD ADVFGQTNNGGALYVYHSEKFDRLAFTFSQFAQGGRFTIEYPSAIDSFGQVSQWKPFDINKDKTLNMTKNQTVNWSVPSD WVRATTHYGSGKTYGGGQYFGSTFLRDGGRLYVAKITWHDENIENRPRLKEVKLKNGFQTVKLTDAPKATPEGQTIQRWR KIRGFDKSADLNQDNYLSWNEYTNRSNKNATARFRWESRVIPFGRMWNQTSSWALTNLGNPEFANAMHHYYQAEWAKQGL NGAYNDDTNKLLGANQFYVYSGGTVDELGLVAGSQAADDAYKAQFSAFLNKLATLDADALIGLNIDTANLFGRNGQNHLV EAGSLYLREHYLFPSTGFSGYAGLAKFWDNSALAKAGQKVIYQATTRYGRVQYFGNTEDNWKQDQYSTLAAFYLNHHPER SFFNQWNSSYLYGSNNTTAENFWKAGVPKNIAYQPSALLAVDLGEPANLVPEGAAAMPLMLSTSTPPKSDYTIIGDSTMN KVEHVGLPGDITYLYPTYIYFAYRSSTDIVAQGPSEMVLAREFTNGRVLYRTDFFGKNANYFSAPKITITLDKPMRPVDK DGNIGGYVSHIEIGGYEGVFLLY
Sequences:
>Translated_743_residues MKPYRSALLALGPLSLLFTPVTWSATAIVLPGLHEQGIDLRDAPVSAAAALEWELVNADVVFGAYENKSDNERVNAIGYM YNQKLELNSGWLENDIRNQAEINNIDYEDFFLHFSEDTIIAEIDSSHGENTLLNRKPMIVGYTASADHAGFWLYQQPPWD ADVFGQTNNGGALYVYHSEKFDRLAFTFSQFAQGGRFTIEYPSAIDSFGQVSQWKPFDINKDKTLNMTKNQTVNWSVPSD WVRATTHYGSGKTYGGGQYFGSTFLRDGGRLYVAKITWHDENIENRPRLKEVKLKNGFQTVKLTDAPKATPEGQTIQRWR KIRGFDKSADLNQDNYLSWNEYTNRSNKNATARFRWESRVIPFGRMWNQTSSWALTNLGNPEFANAMHHYYQAEWAKQGL NGAYNDDTNKLLGANQFYVYSGGTVDELGLVAGSQAADDAYKAQFSAFLNKLATLDADALIGLNIDTANLFGRNGQNHLV EAGSLYLREHYLFPSTGFSGYAGLAKFWDNSALAKAGQKVIYQATTRYGRVQYFGNTEDNWKQDQYSTLAAFYLNHHPER SFFNQWNSSYLYGSNNTTAENFWKAGVPKNIAYQPSALLAVDLGEPANLVPEGAAAMPLMLSTSTPPKSDYTIIGDSTMN KVEHVGLPGDITYLYPTYIYFAYRSSTDIVAQGPSEMVLAREFTNGRVLYRTDFFGKNANYFSAPKITITLDKPMRPVDK DGNIGGYVSHIEIGGYEGVFLLY >Mature_743_residues MKPYRSALLALGPLSLLFTPVTWSATAIVLPGLHEQGIDLRDAPVSAAAALEWELVNADVVFGAYENKSDNERVNAIGYM YNQKLELNSGWLENDIRNQAEINNIDYEDFFLHFSEDTIIAEIDSSHGENTLLNRKPMIVGYTASADHAGFWLYQQPPWD ADVFGQTNNGGALYVYHSEKFDRLAFTFSQFAQGGRFTIEYPSAIDSFGQVSQWKPFDINKDKTLNMTKNQTVNWSVPSD WVRATTHYGSGKTYGGGQYFGSTFLRDGGRLYVAKITWHDENIENRPRLKEVKLKNGFQTVKLTDAPKATPEGQTIQRWR KIRGFDKSADLNQDNYLSWNEYTNRSNKNATARFRWESRVIPFGRMWNQTSSWALTNLGNPEFANAMHHYYQAEWAKQGL NGAYNDDTNKLLGANQFYVYSGGTVDELGLVAGSQAADDAYKAQFSAFLNKLATLDADALIGLNIDTANLFGRNGQNHLV EAGSLYLREHYLFPSTGFSGYAGLAKFWDNSALAKAGQKVIYQATTRYGRVQYFGNTEDNWKQDQYSTLAAFYLNHHPER SFFNQWNSSYLYGSNNTTAENFWKAGVPKNIAYQPSALLAVDLGEPANLVPEGAAAMPLMLSTSTPPKSDYTIIGDSTMN KVEHVGLPGDITYLYPTYIYFAYRSSTDIVAQGPSEMVLAREFTNGRVLYRTDFFGKNANYFSAPKITITLDKPMRPVDK DGNIGGYVSHIEIGGYEGVFLLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83438; Mature: 83438
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYRSALLALGPLSLLFTPVTWSATAIVLPGLHEQGIDLRDAPVSAAAALEWELVNADV CCHHHHHHHHHCCHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCEE VFGAYENKSDNERVNAIGYMYNQKLELNSGWLENDIRNQAEINNIDYEDFFLHFSEDTII EEEECCCCCCCCCEEEEEEEEECEEECCCCCCHHHHCCCHHCCCCCCCCEEEEECCCEEE AEIDSSHGENTLLNRKPMIVGYTASADHAGFWLYQQPPWDADVFGQTNNGGALYVYHSEK EEECCCCCCCCEECCCCEEEEEECCCCCCEEEEEECCCCCHHHCEEECCCCEEEEEECCC FDRLAFTFSQFAQGGRFTIEYPSAIDSFGQVSQWKPFDINKDKTLNMTKNQTVNWSVPSD CHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCH WVRATTHYGSGKTYGGGQYFGSTFLRDGGRLYVAKITWHDENIENRPRLKEVKLKNGFQT HHEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEHCCCCCEE VKLTDAPKATPEGQTIQRWRKIRGFDKSADLNQDNYLSWNEYTNRSNKNATARFRWESRV EEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCEE IPFGRMWNQTSSWALTNLGNPEFANAMHHYYQAEWAKQGLNGAYNDDTNKLLGANQFYVY CCHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEE SGGTVDELGLVAGSQAADDAYKAQFSAFLNKLATLDADALIGLNIDTANLFGRNGQNHLV ECCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCCEE EAGSLYLREHYLFPSTGFSGYAGLAKFWDNSALAKAGQKVIYQATTRYGRVQYFGNTEDN ECCCEEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHCHHEEEEECCCCCEEEEECCCCCC WKQDQYSTLAAFYLNHHPERSFFNQWNSSYLYGSNNTTAENFWKAGVPKNIAYQPSALLA CCHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEE VDLGEPANLVPEGAAAMPLMLSTSTPPKSDYTIIGDSTMNKVEHVGLPGDITYLYPTYIY EECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCEEEEEEEEEE FAYRSSTDIVAQGPSEMVLAREFTNGRVLYRTDFFGKNANYFSAPKITITLDKPMRPVDK EEEECCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEECCEEEEEECCCCCCCCC DGNIGGYVSHIEIGGYEGVFLLY CCCCCCEEEEEEECCCCCEEEEC >Mature Secondary Structure MKPYRSALLALGPLSLLFTPVTWSATAIVLPGLHEQGIDLRDAPVSAAAALEWELVNADV CCHHHHHHHHHCCHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCEE VFGAYENKSDNERVNAIGYMYNQKLELNSGWLENDIRNQAEINNIDYEDFFLHFSEDTII EEEECCCCCCCCCEEEEEEEEECEEECCCCCCHHHHCCCHHCCCCCCCCEEEEECCCEEE AEIDSSHGENTLLNRKPMIVGYTASADHAGFWLYQQPPWDADVFGQTNNGGALYVYHSEK EEECCCCCCCCEECCCCEEEEEECCCCCCEEEEEECCCCCHHHCEEECCCCEEEEEECCC FDRLAFTFSQFAQGGRFTIEYPSAIDSFGQVSQWKPFDINKDKTLNMTKNQTVNWSVPSD CHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCH WVRATTHYGSGKTYGGGQYFGSTFLRDGGRLYVAKITWHDENIENRPRLKEVKLKNGFQT HHEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEHCCCCCEE VKLTDAPKATPEGQTIQRWRKIRGFDKSADLNQDNYLSWNEYTNRSNKNATARFRWESRV EEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCEE IPFGRMWNQTSSWALTNLGNPEFANAMHHYYQAEWAKQGLNGAYNDDTNKLLGANQFYVY CCHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEE SGGTVDELGLVAGSQAADDAYKAQFSAFLNKLATLDADALIGLNIDTANLFGRNGQNHLV ECCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCCEE EAGSLYLREHYLFPSTGFSGYAGLAKFWDNSALAKAGQKVIYQATTRYGRVQYFGNTEDN ECCCEEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHCHHEEEEECCCCCEEEEECCCCCC WKQDQYSTLAAFYLNHHPERSFFNQWNSSYLYGSNNTTAENFWKAGVPKNIAYQPSALLA CCHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEE VDLGEPANLVPEGAAAMPLMLSTSTPPKSDYTIIGDSTMNKVEHVGLPGDITYLYPTYIY EECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCEEEEEEEEEE FAYRSSTDIVAQGPSEMVLAREFTNGRVLYRTDFFGKNANYFSAPKITITLDKPMRPVDK EEEECCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEECCEEEEEECCCCCCCCC DGNIGGYVSHIEIGGYEGVFLLY CCCCCCEEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA