Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976742

Identifier: 156976742

GI number: 156976742

Start: 727430

End: 728041

Strand: Reverse

Name: 156976742

Synonym: VIBHAR_05517

Alternate gene names: NA

Gene position: 728041-727430 (Counterclockwise)

Preceding gene: 156976743

Following gene: 156976739

Centisome position: 33.03

GC content: 42.32

Gene sequence:

>612_bases
GTGAGTGAAATAACGTCATTGGAAGCACTAGAAGCCCTGTATGGTCAGCCAAGCCAACGAGCAAAAAACAAAGTGATGTT
CGAACTAGATGAATATGCCCAGACATTAATCAATCACAGTCATTTTGTCCTCTTTACAACCAGTGATGAACAAGGTTTTA
CTGATATATCCCCCCGTGGTGGGCTTCCAGGATTTATTAAAATCTTAGACAATAACACCCTGCTAATGCCTGATAGCTCT
GGTAATAATCGACTGGACAGCTTTAAAAACATTCTTGCAAATCCGAAGGTCGGACTTTTATTTATGGTGAATGGGATTGA
TGAGGTCGTGAGACTAAAGGGCGTTGCCAGTTTACACACAAATGAAACGTTAAAGTCAATGTGCCCTAATGGGAGCAAAG
CGCCTAAAATCGTCATCAAAATCCAAGTAGAAAGCTTGTACTTCCATTGCGCGAAAGCCATCATGCGTGCAAAGCTTTGG
AGCGATACGTACCGCGTCGATAGAAAAATCCTCCCTTCTCTTGCTCAAATCATGAAAGCACAGCAGAGCAACCCAGATTT
AGTGTCGGCCACTCAAGAAGAAATGGTCGAATATTACAAGTCAACGCTTTAA

Upstream 100 bases:

>100_bases
TGGGACTCCAACAGCACCAAATACCAACTCGGTTGCTTATGCCGTTTTGACAAGGCATTATAACGGCGACAATTTATAAA
ATAAAAATGGAGACGCTCAA

Downstream 100 bases:

>100_bases
CGAGCGCTTGTTTAAAAATGCCGCATCATGGCTTGATGCGGCGTTTTAATATTGGCCTAAACTAATGAGCCTAGACCTCT
TTTAACCATCACTTTGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphohydrolase; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; NTP Pyrophosphohydrolase; Pyridoxine Biosynthesis Protein; Transcriptional Regulator AraC Family; Pyridoxamine 5-Phosphate Oxidase Family; Fmn Flavoprotein; Pyridoxamine 5\-Phosphate Oxidase Family Protein; Hydrolase; Pyridoxamine 5-Phosphate Oxidase-Related

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSEITSLEALEALYGQPSQRAKNKVMFELDEYAQTLINHSHFVLFTTSDEQGFTDISPRGGLPGFIKILDNNTLLMPDSS
GNNRLDSFKNILANPKVGLLFMVNGIDEVVRLKGVASLHTNETLKSMCPNGSKAPKIVIKIQVESLYFHCAKAIMRAKLW
SDTYRVDRKILPSLAQIMKAQQSNPDLVSATQEEMVEYYKSTL

Sequences:

>Translated_203_residues
MSEITSLEALEALYGQPSQRAKNKVMFELDEYAQTLINHSHFVLFTTSDEQGFTDISPRGGLPGFIKILDNNTLLMPDSS
GNNRLDSFKNILANPKVGLLFMVNGIDEVVRLKGVASLHTNETLKSMCPNGSKAPKIVIKIQVESLYFHCAKAIMRAKLW
SDTYRVDRKILPSLAQIMKAQQSNPDLVSATQEEMVEYYKSTL
>Mature_202_residues
SEITSLEALEALYGQPSQRAKNKVMFELDEYAQTLINHSHFVLFTTSDEQGFTDISPRGGLPGFIKILDNNTLLMPDSSG
NNRLDSFKNILANPKVGLLFMVNGIDEVVRLKGVASLHTNETLKSMCPNGSKAPKIVIKIQVESLYFHCAKAIMRAKLWS
DTYRVDRKILPSLAQIMKAQQSNPDLVSATQEEMVEYYKSTL

Specific function: Unknown

COG id: COG3576

COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22715; Mature: 22584

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEITSLEALEALYGQPSQRAKNKVMFELDEYAQTLINHSHFVLFTTSDEQGFTDISPRG
CCCHHHHHHHHHHHCCCCHHHHHHHEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
GLPGFIKILDNNTLLMPDSSGNNRLDSFKNILANPKVGLLFMVNGIDEVVRLKGVASLHT
CCCCEEEEECCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHH
NETLKSMCPNGSKAPKIVIKIQVESLYFHCAKAIMRAKLWSDTYRVDRKILPSLAQIMKA
HHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQSNPDLVSATQEEMVEYYKSTL
HCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEITSLEALEALYGQPSQRAKNKVMFELDEYAQTLINHSHFVLFTTSDEQGFTDISPRG
CCHHHHHHHHHHHCCCCHHHHHHHEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
GLPGFIKILDNNTLLMPDSSGNNRLDSFKNILANPKVGLLFMVNGIDEVVRLKGVASLHT
CCCCEEEEECCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHH
NETLKSMCPNGSKAPKIVIKIQVESLYFHCAKAIMRAKLWSDTYRVDRKILPSLAQIMKA
HHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQSNPDLVSATQEEMVEYYKSTL
HCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA