| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976723
Identifier: 156976723
GI number: 156976723
Start: 708822
End: 708935
Strand: Reverse
Name: 156976723
Synonym: VIBHAR_05498
Alternate gene names: NA
Gene position: 708935-708822 (Counterclockwise)
Preceding gene: 156976724
Following gene: 156976706
Centisome position: 32.17
GC content: 47.37
Gene sequence:
>114_bases GTGACTTCAAGATGCAGGATTCAGAGCGTTGTCATTGATTCGAGGGCAAGGAAGACAACGCAGCGTAATAGCCAGCTATT TCCAAGTTGTTTGACGCAGCAATCGGGTCAATGA
Upstream 100 bases:
>100_bases GGACAGAACCATCTCCCCTCAGGCAAAAGCGTTTCATGATTTGTGCATTCATTACTTGAACTACCAAGAAGAAGTAGAAT CCGCATAAGCATATACCCAA
Downstream 100 bases:
>100_bases CACGCTCCCAAAGGGTCCTCTTTGCAAATAGTAAGGGCCTTGGCTTGTATACTTTGTTATCGATTCTTGATTTAGAACCA CCAAACCTTTAAATCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MTSRCRIQSVVIDSRARKTTQRNSQLFPSCLTQQSGQ
Sequences:
>Translated_37_residues MTSRCRIQSVVIDSRARKTTQRNSQLFPSCLTQQSGQ >Mature_36_residues TSRCRIQSVVIDSRARKTTQRNSQLFPSCLTQQSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4213; Mature: 4082
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRCRIQSVVIDSRARKTTQRNSQLFPSCLTQQSGQ CCCCCCHHHHHHCCHHHHHHHCCCCCCHHHHCCCCCC >Mature Secondary Structure TSRCRIQSVVIDSRARKTTQRNSQLFPSCLTQQSGQ CCCCCHHHHHHCCHHHHHHHCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA