Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976698

Identifier: 156976698

GI number: 156976698

Start: 685556

End: 686158

Strand: Reverse

Name: 156976698

Synonym: VIBHAR_05473

Alternate gene names: NA

Gene position: 686158-685556 (Counterclockwise)

Preceding gene: 156976702

Following gene: 156976697

Centisome position: 31.13

GC content: 42.79

Gene sequence:

>603_bases
ATGAAATCGATCCAGTTTTCGAACTTAACTTTAGAATGTGCAACAAGGACGTTACGTAATCAAAACGGAAATAAAGTCGT
TCTCAGGCCTCTTCCTTATGAGGTTCTTTTATTGCTCCTGCAAAAAAATGGACCAGTATCCCGAGAAGAGCTTTTCAAGA
CCTGCTGGGAAGGGTTGGTCGTGACCGATCAAGCATTAACCAACGTGGTTTCTGGCCTACGTCGTAACCTGCTTTCTTTA
AAAGCCCAAAACGCTGAAATCAAAACTATCAGTAAAGTCGGTTATTTTATTCAGGCCGAATCCATTAAGGCCATCACGCA
ACCATCACCTCAAATTGAAGAAACGGGCTCAGAAGCTGTCTGCGATAATCAGAGCGATGAAGCAAGCCTCACCCATCCAA
TGCGACAGAAAACCAGTACTATCCTTCTAGCTGCGGTTTATGTTGTTGGCACCGTTGTAGCTTTGCTCACCCTTCTAAAC
TTAAAACCACTTTTCGAGAAGCCAAGCTATATAGAAAAAGACAACTATAAACACCTTGTCGTTGGGCAAACCAACATCTA
TTTACATGACGCCACTCCAGGTTTTTTTCGGCCGACAATTTAA

Upstream 100 bases:

>100_bases
CTCGGTAGACTGTGCCGCTTTCAAAATAAGTTTAGGTTCCCATAACTTTTTAATCTCACCTAACGAGATAGAAGTTGCCT
TCTAAAAAGCCAATTTAGCA

Downstream 100 bases:

>100_bases
AACTGCTACTGAATAAATTACCCCAAGCGCAATGTAATGCAGACGTGTACATACGCCTTTTCTCTTCGATCTATGAGGCA
AATATGGTCGCTTTGACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKSIQFSNLTLECATRTLRNQNGNKVVLRPLPYEVLLLLLQKNGPVSREELFKTCWEGLVVTDQALTNVVSGLRRNLLSL
KAQNAEIKTISKVGYFIQAESIKAITQPSPQIEETGSEAVCDNQSDEASLTHPMRQKTSTILLAAVYVVGTVVALLTLLN
LKPLFEKPSYIEKDNYKHLVVGQTNIYLHDATPGFFRPTI

Sequences:

>Translated_200_residues
MKSIQFSNLTLECATRTLRNQNGNKVVLRPLPYEVLLLLLQKNGPVSREELFKTCWEGLVVTDQALTNVVSGLRRNLLSL
KAQNAEIKTISKVGYFIQAESIKAITQPSPQIEETGSEAVCDNQSDEASLTHPMRQKTSTILLAAVYVVGTVVALLTLLN
LKPLFEKPSYIEKDNYKHLVVGQTNIYLHDATPGFFRPTI
>Mature_200_residues
MKSIQFSNLTLECATRTLRNQNGNKVVLRPLPYEVLLLLLQKNGPVSREELFKTCWEGLVVTDQALTNVVSGLRRNLLSL
KAQNAEIKTISKVGYFIQAESIKAITQPSPQIEETGSEAVCDNQSDEASLTHPMRQKTSTILLAAVYVVGTVVALLTLLN
LKPLFEKPSYIEKDNYKHLVVGQTNIYLHDATPGFFRPTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22285; Mature: 22285

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIQFSNLTLECATRTLRNQNGNKVVLRPLPYEVLLLLLQKNGPVSREELFKTCWEGLV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCEE
VTDQALTNVVSGLRRNLLSLKAQNAEIKTISKVGYFIQAESIKAITQPSPQIEETGSEAV
ECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCHHHCCCCCCHHHCCCCCC
CDNQSDEASLTHPMRQKTSTILLAAVYVVGTVVALLTLLNLKPLFEKPSYIEKDNYKHLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEE
VGQTNIYLHDATPGFFRPTI
EECCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKSIQFSNLTLECATRTLRNQNGNKVVLRPLPYEVLLLLLQKNGPVSREELFKTCWEGLV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCEE
VTDQALTNVVSGLRRNLLSLKAQNAEIKTISKVGYFIQAESIKAITQPSPQIEETGSEAV
ECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCHHHCCCCCCHHHCCCCCC
CDNQSDEASLTHPMRQKTSTILLAAVYVVGTVVALLTLLNLKPLFEKPSYIEKDNYKHLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEE
VGQTNIYLHDATPGFFRPTI
EECCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA