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The map label for this gene is 156976692

Identifier: 156976692

GI number: 156976692

Start: 681885

End: 682274

Strand: Reverse

Name: 156976692

Synonym: VIBHAR_05467

Alternate gene names: NA

Gene position: 682274-681885 (Counterclockwise)

Preceding gene: 156976697

Following gene: 156976691

Centisome position: 30.96

GC content: 49.74

Gene sequence:

>390_bases
ATGAGATTAAAGAACACGCATTTCATGGGAACAGGTATAAAGGCGGCTCTCCTCGCCACGATGTGCTTCTCTCCTTCCAC
TTTCGCAGCCGACGCTAAAGTCGACAAGCAATTTGAGGTTGGTAGAGAGAAGTCGAAAGTATGTATGACATGTCACGGTG
CTGACGGCATCTCTACGATCGACGCCTATCCAAACCTACGCGGTCAGAAGAAAAGTTACCTGATCTCTTCTTTGAAAGAT
TACAAAGCGCGGGAGCGGACTAGTGGGTTGGCGGTACTCATGCAGCAGCAAGCCGACGCCCTGTCTGACCAAGATATCGA
AGACATTGCACACTACTATTCGCAGTTAGGGAACGAGCATTCACCGTCAGATAACGAGCCCCAGCCTTAA

Upstream 100 bases:

>100_bases
AAAAATACGCCGGTTCATTCACCTCATAAATAAGAGAGAAGTACTGGCTTCAATAGCCTAAGTTAGTGAAAAACGCATTC
AATTTACTAGGGAAACAGTG

Downstream 100 bases:

>100_bases
ACGAGGAGCGTTCTTATGGAACAAACAACTACTCAATACAACACTCAAGTTGTGAAGTATTTTGTGTTGGCATCGTTGGT
TTGGGCGATTGCAGGGATGA

Product: cytochrome c

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRLKNTHFMGTGIKAALLATMCFSPSTFAADAKVDKQFEVGREKSKVCMTCHGADGISTIDAYPNLRGQKKSYLISSLKD
YKARERTSGLAVLMQQQADALSDQDIEDIAHYYSQLGNEHSPSDNEPQP

Sequences:

>Translated_129_residues
MRLKNTHFMGTGIKAALLATMCFSPSTFAADAKVDKQFEVGREKSKVCMTCHGADGISTIDAYPNLRGQKKSYLISSLKD
YKARERTSGLAVLMQQQADALSDQDIEDIAHYYSQLGNEHSPSDNEPQP
>Mature_129_residues
MRLKNTHFMGTGIKAALLATMCFSPSTFAADAKVDKQFEVGREKSKVCMTCHGADGISTIDAYPNLRGQKKSYLISSLKD
YKARERTSGLAVLMQQQADALSDQDIEDIAHYYSQLGNEHSPSDNEPQP

Specific function: Electron donor for periplasmic nitrate reductase [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14232; Mature: 14232

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKNTHFMGTGIKAALLATMCFSPSTFAADAKVDKQFEVGREKSKVCMTCHGADGISTI
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCC
DAYPNLRGQKKSYLISSLKDYKARERTSGLAVLMQQQADALSDQDIEDIAHYYSQLGNEH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
SPSDNEPQP
CCCCCCCCC
>Mature Secondary Structure
MRLKNTHFMGTGIKAALLATMCFSPSTFAADAKVDKQFEVGREKSKVCMTCHGADGISTI
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCC
DAYPNLRGQKKSYLISSLKDYKARERTSGLAVLMQQQADALSDQDIEDIAHYYSQLGNEH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
SPSDNEPQP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7925398; 10369779 [H]