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The map label for this gene is modF [H]

Identifier: 156976675

GI number: 156976675

Start: 666175

End: 666771

Strand: Reverse

Name: modF [H]

Synonym: VIBHAR_05449

Alternate gene names: 156976675

Gene position: 666771-666175 (Counterclockwise)

Preceding gene: 156976676

Following gene: 156976673

Centisome position: 30.25

GC content: 44.39

Gene sequence:

>597_bases
GTGAAAGGACCAAATGGCTGCGGAAAAAGCACATTACTAGGCCTGATTTTTGGTGATCATCCCCAATGTTATAGCAACGA
CATCCACATCTTTGGTAAAAAGCGTGGCAGTGGCGAGACCATTTGGGAAATTAAGCAGCACATTGGCATGGTATCTTCGG
CGTTACATCTCCAGTACCGCGTGAACTGCAGTGCATTAGAGGTGATTCTGTCGGGCTTTTATGACTCCATTGGACTGTAT
TCTCGGCCAAGTAAAAAAGAAACCAACGTCGCGAAAGAGTGGCTGGCGATTCTCCATATGGCGCAACACGAGAAGACCTC
CTTTAAGCCACTAGAGTATGGTCAACAACGTTTATTGCTGATTGCCAGAGCAATAGTGAAACAGCCTACTCTGCTGATTT
TGGACGAGCCTTATCAAGGCTTAGATTACTTAGGGCGAGTTCTTGTGAAAAATACACTAGAGCTAATCGCGAAAGAAAAT
CTAAGCCAACTTCTCTACGTTTCCCATTATCAAGAAGATGGCTTAGACAGCATTCAAAACTATCTTGAGTTTAAGTTCGA
TCAAGCGTCTCAGTGCTACAAGGGGCACATCGAATAA

Upstream 100 bases:

>100_bases
AAACCCTATCTTTGAGTTAAAGAACGGTAAGGTTGAATACACTGAGAAGACCATTTTCAGCGATTTAAACTGGCGTATCG
ATAAAGGTCAACACTAGCAA

Downstream 100 bases:

>100_bases
ACGTCTACTCTCTATTGCCAAGCACTTCGGCATAAGGGAGTGGCTTAGCATAGAAGTAACCTTGGTGAATGTTCACCCCT
AACGCTTTTAAGTGGTCAGC

Product: molybdenum transporter ATP-binding subunit modF

Products: NA

Alternate protein names: Photorepair protein PhrA [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKGPNGCGKSTLLGLIFGDHPQCYSNDIHIFGKKRGSGETIWEIKQHIGMVSSALHLQYRVNCSALEVILSGFYDSIGLY
SRPSKKETNVAKEWLAILHMAQHEKTSFKPLEYGQQRLLLIARAIVKQPTLLILDEPYQGLDYLGRVLVKNTLELIAKEN
LSQLLYVSHYQEDGLDSIQNYLEFKFDQASQCYKGHIE

Sequences:

>Translated_198_residues
MKGPNGCGKSTLLGLIFGDHPQCYSNDIHIFGKKRGSGETIWEIKQHIGMVSSALHLQYRVNCSALEVILSGFYDSIGLY
SRPSKKETNVAKEWLAILHMAQHEKTSFKPLEYGQQRLLLIARAIVKQPTLLILDEPYQGLDYLGRVLVKNTLELIAKEN
LSQLLYVSHYQEDGLDSIQNYLEFKFDQASQCYKGHIE
>Mature_198_residues
MKGPNGCGKSTLLGLIFGDHPQCYSNDIHIFGKKRGSGETIWEIKQHIGMVSSALHLQYRVNCSALEVILSGFYDSIGLY
SRPSKKETNVAKEWLAILHMAQHEKTSFKPLEYGQQRLLLIARAIVKQPTLLILDEPYQGLDYLGRVLVKNTLELIAKEN
LSQLLYVSHYQEDGLDSIQNYLEFKFDQASQCYKGHIE

Specific function: Involved in the transport of molybdenum into the cell. Involved in photorepair. Could act on UV-induced DNA damage other than pyrimidine dimers [H]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI1786975, Length=186, Percent_Identity=54.8387096774194, Blast_Score=211, Evalue=3e-56,
Organism=Escherichia coli, GI1790467, Length=201, Percent_Identity=30.3482587064677, Blast_Score=62, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320266, Length=184, Percent_Identity=27.1739130434783, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 22489; Mature: 22489

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGPNGCGKSTLLGLIFGDHPQCYSNDIHIFGKKRGSGETIWEIKQHIGMVSSALHLQYR
CCCCCCCCHHHEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEE
VNCSALEVILSGFYDSIGLYSRPSKKETNVAKEWLAILHMAQHEKTSFKPLEYGQQRLLL
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IARAIVKQPTLLILDEPYQGLDYLGRVLVKNTLELIAKENLSQLLYVSHYQEDGLDSIQN
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YLEFKFDQASQCYKGHIE
HHHHCCCCHHHHHCCCCC
>Mature Secondary Structure
MKGPNGCGKSTLLGLIFGDHPQCYSNDIHIFGKKRGSGETIWEIKQHIGMVSSALHLQYR
CCCCCCCCHHHEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEE
VNCSALEVILSGFYDSIGLYSRPSKKETNVAKEWLAILHMAQHEKTSFKPLEYGQQRLLL
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IARAIVKQPTLLILDEPYQGLDYLGRVLVKNTLELIAKENLSQLLYVSHYQEDGLDSIQN
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YLEFKFDQASQCYKGHIE
HHHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8564363; 8550508; 8905232; 9278503; 8310005 [H]