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The map label for this gene is 156976673

Identifier: 156976673

GI number: 156976673

Start: 663483

End: 664217

Strand: Reverse

Name: 156976673

Synonym: VIBHAR_05447

Alternate gene names: NA

Gene position: 664217-663483 (Counterclockwise)

Preceding gene: 156976675

Following gene: 156976672

Centisome position: 30.14

GC content: 48.98

Gene sequence:

>735_bases
ATGACGACAAACAAAGCCAACGCTAACCAAGTCAACGAAAAGGCGCTGCAATTGCTGATGCAAGTCGCAGTTAGTCAATT
TCCAGTCTCAGCGAAAACGCTCAGTGAACAACTGAATGTGCCTTTAAGTAGTCTTTACCGACACTTGAAGCTACTCAAAG
AGTGGAACTTGATCGAAGAAAGCGTACACGACAAAACTTTTGTAGTTGGTCCTGCCGCCCTGCTGTTAATGCACAGCTAT
GAAACCGCTCAACACGGTTTGGATATGGTGGAAACCATTCTTGCTCGATTGGTTCAACAAACGGGTGAGATGGCGGCTTA
CATGGTGCCTTCTGGCTATCGTGCGCTTTGTGTCAGACAAAAAGAAAGTATGCAGGCGCTTCGATGCAGCTACGTCCAGG
GTCAAAGTCAACCATTGCTTCGTGGCGCCTCATCTAAGGTGATGCTGGCTTTCATGCCTCAAAGCCGTTGCGAAAAAATC
TTGCGTCATTTTGGGCAAGATCATCGCCTCAGCGAATGGGAACAGGAGCTTAGCACCATCCGTAAGAACGGATACGCTGT
TAGTACATCAGAAATCGATCCTGGTGTATCTGGCATCAGTGCCCCAGTCATGAAAGGAAGTAAATTGATTGGCGCGGTCT
CGGTGATGGCTCCGGCTCACCGAGTCGAGAAGGATAAGCAGCGTATCATTTTGCATGTGTTGCAGGCAGCGAGGGCGTTG
CCGCCAGAAAGGTAA

Upstream 100 bases:

>100_bases
TTTCTCACCCTATGAGAATATCCATTTCTAATTATTTTCCTTTTCTCAGCTATTAAGAATTATAGTTGTTGCCTATCCAT
TATCACGTTACAACACGCTC

Downstream 100 bases:

>100_bases
TTCACCATGTTGAGCTTTTTCAAACGTTACAAACTTCATCGAGCGAATAAATCAATCCATCACTACCCTTTTTCTTTTAT
GACGGTATGTGAGCATTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; Regulatory Proteins IclR; Transcriptional Regulator IclR; Transcriptional Regulator Family Protein; Transcriptional Regulator Family; Regulatory Protein IclR; Transcription Regulator; Transcriptional Regulator IclR Family Protein; Transcriptional Regulatory Protein; IclR-Family Protein Transcriptional Regulator; Transcriptional Regulator IclR-Family; Helix-Turn-Helix Type; Iclr Family Transcriptional Regulator; Transcription Regulator Protein; IclR Family Regulatory Protein; ArcR Family Transcription Regulator; IclR Helix-Turn-Helix Domain Family; IclR Family Protein Transcriptional Regulator

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTTNKANANQVNEKALQLLMQVAVSQFPVSAKTLSEQLNVPLSSLYRHLKLLKEWNLIEESVHDKTFVVGPAALLLMHSY
ETAQHGLDMVETILARLVQQTGEMAAYMVPSGYRALCVRQKESMQALRCSYVQGQSQPLLRGASSKVMLAFMPQSRCEKI
LRHFGQDHRLSEWEQELSTIRKNGYAVSTSEIDPGVSGISAPVMKGSKLIGAVSVMAPAHRVEKDKQRIILHVLQAARAL
PPER

Sequences:

>Translated_244_residues
MTTNKANANQVNEKALQLLMQVAVSQFPVSAKTLSEQLNVPLSSLYRHLKLLKEWNLIEESVHDKTFVVGPAALLLMHSY
ETAQHGLDMVETILARLVQQTGEMAAYMVPSGYRALCVRQKESMQALRCSYVQGQSQPLLRGASSKVMLAFMPQSRCEKI
LRHFGQDHRLSEWEQELSTIRKNGYAVSTSEIDPGVSGISAPVMKGSKLIGAVSVMAPAHRVEKDKQRIILHVLQAARAL
PPER
>Mature_243_residues
TTNKANANQVNEKALQLLMQVAVSQFPVSAKTLSEQLNVPLSSLYRHLKLLKEWNLIEESVHDKTFVVGPAALLLMHSYE
TAQHGLDMVETILARLVQQTGEMAAYMVPSGYRALCVRQKESMQALRCSYVQGQSQPLLRGASSKVMLAFMPQSRCEKIL
RHFGQDHRLSEWEQELSTIRKNGYAVSTSEIDPGVSGISAPVMKGSKLIGAVSVMAPAHRVEKDKQRIILHVLQAARALP
PER

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27131; Mature: 27000

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNKANANQVNEKALQLLMQVAVSQFPVSAKTLSEQLNVPLSSLYRHLKLLKEWNLIEE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SVHDKTFVVGPAALLLMHSYETAQHGLDMVETILARLVQQTGEMAAYMVPSGYRALCVRQ
HHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
KESMQALRCSYVQGQSQPLLRGASSKVMLAFMPQSRCEKILRHFGQDHRLSEWEQELSTI
HHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHH
RKNGYAVSTSEIDPGVSGISAPVMKGSKLIGAVSVMAPAHRVEKDKQRIILHVLQAARAL
HHCCCEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPER
CCCC
>Mature Secondary Structure 
TTNKANANQVNEKALQLLMQVAVSQFPVSAKTLSEQLNVPLSSLYRHLKLLKEWNLIEE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SVHDKTFVVGPAALLLMHSYETAQHGLDMVETILARLVQQTGEMAAYMVPSGYRALCVRQ
HHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
KESMQALRCSYVQGQSQPLLRGASSKVMLAFMPQSRCEKILRHFGQDHRLSEWEQELSTI
HHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHH
RKNGYAVSTSEIDPGVSGISAPVMKGSKLIGAVSVMAPAHRVEKDKQRIILHVLQAARAL
HHCCCEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPER
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA