Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976599

Identifier: 156976599

GI number: 156976599

Start: 600143

End: 600514

Strand: Direct

Name: 156976599

Synonym: VIBHAR_05373

Alternate gene names: NA

Gene position: 600143-600514 (Clockwise)

Preceding gene: 156976598

Following gene: 156976600

Centisome position: 27.23

GC content: 47.58

Gene sequence:

>372_bases
ATGATTTTTAGTATAATAAATGCAATGAAAAAGACGCCAAATATTAACCCAGAAAGCCAAGATGTTGCCAAGCTACAAGC
GATGGTGAAAGCCCTTCTGCTCTCTCAGGAGCGGAAGGAGTCTCAATGGAAACAAGAGCGTCAATCCTTACTCGAACAGC
TCAAGCTGGCCTTCGACCGTCAGTTCGCGAAACGCTCCGAGGCGCTAAAGCCTTACGATGAATCTCAAGGTGACCTCTTC
AACGAAGTGGAATGTGAAGCCGCTAAGGAAGAAGAGGTGAAGTGGTCACGACGACCACTACAACGAAGAAGCGTGGTAAA
CGCAAGCCCCTTCCAAAGACTTTGCCTCGTGAGGTTATCGAACTCGATTTAG

Upstream 100 bases:

>100_bases
GCTTTCTGGCTTCACGATTATCGGCCATAAACCCGTTCAAATAAACGATTTTACAATGACTTAATCGATAATAAAGCCTT
ATCTACCAAGCGTTAACGGC

Downstream 100 bases:

>100_bases
ACGACCATGAAAAACAGTGTGCCTGCTGCCAACATAGTCTGCATAAAATCGGTGAAGACCGCAGTGAGAAACTTGAGTTC
TCACCAGCTGTGCTCAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLF
NEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLSNSI

Sequences:

>Translated_123_residues
MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLF
NEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLSNSI
>Mature_123_residues
MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLF
NEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLSNSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14338; Mature: 14338

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDR
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFAKRSEALKPYDESQGDLFNEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLS
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
NSI
CCC
>Mature Secondary Structure
MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDR
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFAKRSEALKPYDESQGDLFNEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLS
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
NSI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA