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The map label for this gene is citC [H]

Identifier: 156976528

GI number: 156976528

Start: 537253

End: 538041

Strand: Direct

Name: citC [H]

Synonym: VIBHAR_05301

Alternate gene names: 156976528

Gene position: 537253-538041 (Clockwise)

Preceding gene: 156976527

Following gene: 156976529

Centisome position: 24.38

GC content: 34.85

Gene sequence:

>789_bases
ATGATGGCGAACGAAGTTGGGGATAGAATTCTTTCAAAATTAGTAAGCCGACCAACGGTTCAATCAGTTTGTGCTCTCAC
AGCTAATCAGAATGAAAGCGATTTCTATAAAATATTGGATAATTTTAAGTACTTTTTATTTAAACACGTGGCTCGAACAT
TAGAGTCTTGTGAAATGAAAAGTTATTTATCTTTACTAGAGCAATATATTCCAGATGATGGGGTTAATGTCGGTAGCATT
GCTGTAAATTGTAATCCTATCACAAATGGTCACATGTATTTGATTGATTATGCTTCTAAGAAAGTTGATAAGCTATTTAT
TTTTGTTATTGAAGAGGACTTGTCTTTCTTTAAGTTTAAAGACCGCTTACAACTTGTTCATGATAGCTCTCGACATTTAG
AAAATGTAACGGTACTCCCCGGCGGGAAGTTTATTTGTACTGAACTTACTTATCCAGATTACTTTGATAAAGATGCAAAA
AGTGAAGTTGTGGCTGATGCTTCTATGGAAGCTTGGTTCTTTTGTGAGTTTATTGCTAAGAAATTAAATATTAGCAAGAT
TTTCTTGGGTGATGAGCCAACCTGTAAAGTAACCAAGCAGTACAACCAGAAAATGCAAGAGCTGTTGCCTGAATACAATA
TTGACGTGGATATTATTGAACGTATTTCAACAGGTGGTCGAGTCATAAGTGCTTCTACAGTTCGTAAATTACTAGAAGAA
AGAGATTTTGACTCAATTAAGCCACTAGTGCCGACTCCGACATATAAGTTTTTGATGGCTAATTATTGA

Upstream 100 bases:

>100_bases
AAGAATTGAATCCATTGATTTAAACGAGATAGATAGAGGTAACAAATTCTTTCTTGATTTAGATAAAGTAAATTGCCATT
TCTCTCCTTTAGGGAATGAA

Downstream 100 bases:

>100_bases
TTTGTTTTCCAACGCTTCAAAACAAAAAAAGCGGCATTGAGCCGCTTTTTGAATTTCTTCGTCTTAGAATCGCAGAGATT
AAGGCCTGAGGGCTCCCCAC

Product: citrate lyase ligase

Products: NA

Alternate protein names: Acetate:SH-citrate lyase ligase; Citrate lyase synthetase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MMANEVGDRILSKLVSRPTVQSVCALTANQNESDFYKILDNFKYFLFKHVARTLESCEMKSYLSLLEQYIPDDGVNVGSI
AVNCNPITNGHMYLIDYASKKVDKLFIFVIEEDLSFFKFKDRLQLVHDSSRHLENVTVLPGGKFICTELTYPDYFDKDAK
SEVVADASMEAWFFCEFIAKKLNISKIFLGDEPTCKVTKQYNQKMQELLPEYNIDVDIIERISTGGRVISASTVRKLLEE
RDFDSIKPLVPTPTYKFLMANY

Sequences:

>Translated_262_residues
MMANEVGDRILSKLVSRPTVQSVCALTANQNESDFYKILDNFKYFLFKHVARTLESCEMKSYLSLLEQYIPDDGVNVGSI
AVNCNPITNGHMYLIDYASKKVDKLFIFVIEEDLSFFKFKDRLQLVHDSSRHLENVTVLPGGKFICTELTYPDYFDKDAK
SEVVADASMEAWFFCEFIAKKLNISKIFLGDEPTCKVTKQYNQKMQELLPEYNIDVDIIERISTGGRVISASTVRKLLEE
RDFDSIKPLVPTPTYKFLMANY
>Mature_262_residues
MMANEVGDRILSKLVSRPTVQSVCALTANQNESDFYKILDNFKYFLFKHVARTLESCEMKSYLSLLEQYIPDDGVNVGSI
AVNCNPITNGHMYLIDYASKKVDKLFIFVIEEDLSFFKFKDRLQLVHDSSRHLENVTVLPGGKFICTELTYPDYFDKDAK
SEVVADASMEAWFFCEFIAKKLNISKIFLGDEPTCKVTKQYNQKMQELLPEYNIDVDIIERISTGGRVISASTVRKLLEE
RDFDSIKPLVPTPTYKFLMANY

Specific function: Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase [H]

COG id: COG3053

COG function: function code C; Citrate lyase synthetase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI87081765, Length=208, Percent_Identity=36.0576923076923, Blast_Score=128, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR005216
- InterPro:   IPR013166
- InterPro:   IPR004821
- InterPro:   IPR014729 [H]

Pfam domain/function: PF08218 Citrate_ly_lig [H]

EC number: =6.2.1.22 [H]

Molecular weight: Translated: 30093; Mature: 30093

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMANEVGDRILSKLVSRPTVQSVCALTANQNESDFYKILDNFKYFLFKHVARTLESCEMK
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLSLLEQYIPDDGVNVGSIAVNCNPITNGHMYLIDYASKKVDKLFIFVIEEDLSFFKFK
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHHH
DRLQLVHDSSRHLENVTVLPGGKFICTELTYPDYFDKDAKSEVVADASMEAWFFCEFIAK
HHHHHHHCCCHHHCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
KLNISKIFLGDEPTCKVTKQYNQKMQELLPEYNIDVDIIERISTGGRVISASTVRKLLEE
HCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHH
RDFDSIKPLVPTPTYKFLMANY
CCCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MMANEVGDRILSKLVSRPTVQSVCALTANQNESDFYKILDNFKYFLFKHVARTLESCEMK
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLSLLEQYIPDDGVNVGSIAVNCNPITNGHMYLIDYASKKVDKLFIFVIEEDLSFFKFK
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHHH
DRLQLVHDSSRHLENVTVLPGGKFICTELTYPDYFDKDAKSEVVADASMEAWFFCEFIAK
HHHHHHHCCCHHHCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
KLNISKIFLGDEPTCKVTKQYNQKMQELLPEYNIDVDIIERISTGGRVISASTVRKLLEE
HCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHH
RDFDSIKPLVPTPTYKFLMANY
CCCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7830578 [H]