| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976485
Identifier: 156976485
GI number: 156976485
Start: 506643
End: 507758
Strand: Reverse
Name: 156976485
Synonym: VIBHAR_05258
Alternate gene names: NA
Gene position: 507758-506643 (Counterclockwise)
Preceding gene: 156976488
Following gene: 156976482
Centisome position: 23.04
GC content: 45.25
Gene sequence:
>1116_bases ATGGTGAGAATTACACGTAATAATGACCTCGTATTGAAACGTTACGAGGGCAATTCAATGAAAGGTTTTAGCAAAAAAGT TCTTCTAGCAGCATCTGTTGCAATGGCAGTTGGCAGCATCTCTACCGCAGCAAATGCGTGTTCACGTTTGGTTTGGGAGA CTCAAGACCACGGTGTATTTGTCTCTCGTACCATGGATTGGATGGAAGCCAATCAGCCAACCATTGATGTTCGTCACGCA GGCCAAACCTACCGCGGCTACGATAAAGATGATGCGCTTACGTGCACATCGAAATACGCTTCTATCGGTGTAAGTATTTA CGGCGTGGGCATTATTGATGGCTTTAACGAGAAAGGCTTTGCGGCGAATGCCCTGTTCTTGGATGAAGAAAACCCAGGGG CACCACAAGCTGGCAAACAACAAATTGAAAACTCGCGTTTTGTCGCCTATTTGATTGATAGCTTTGCATCCGTTGATGAA GCATTGAAGAATCTAGCTTCAATCCAAATCCAACAGTTCAGCCACAATGGCATCGAAATGAAGGGACATTATTCATTAGA AGACGCAAGTGGTGACTCTGCTGTGTTGGAATACATCGACGGCGCATGGCAAGTTCATCATGGCAAACAATATGACGTGA TGACTAACAGCCCAGAGTACGCGCAACACTTGAAAAACTGGCAAGAAGCGCAACCAAAAGCGAAGAGTGATGTGAATGGT GAGTTCCCGATCCCAGGTAACATTAATTCTGCTCAACGCTTTATCTGGAACAGCTACATGAAGGACCAACTTAAAGAGCC TAGCAGCTACACCAACGGCATTGCGAAACTGGATAGTGTGACCTATAAAATCCCATTGGATGCGGCAAACCGCCCAGTGA ATGGCGAAATGCGTGGCTACGCAACCATCTATGGTTTGGTGTACAACCTAGACCAAAAAGTAATGAACGTGCGTTACCAG TATGACGACAGTTACACGCAGTACTCAGTGGACTTTAATAAGTTGAATGACGGCCATAACTACACCATCAAAGCCGATTT ACCGGATCTGTTTGGTGACATTTCATCTCGCTTAGAAAAAGGCGATGGCGTAATGGGTCAACACTTAGTGAAATAA
Upstream 100 bases:
>100_bases ACTGGCTCTGGGCATTGGAAGCTCCTCTAACAATAAACCCGTTTATCTTAGCTCAACCGATATCCTTTTGTTGCAAAGTT TGCAACATAACTGAGATTAA
Downstream 100 bases:
>100_bases CTCAGATTACGTAAAAAACAGAACTTGAAAGGTGTGTGGACAAAAGCACCATTCAAAAAAGCGCCGACATGTTCGGCGCT TTTCCTTTCTATTCGTTTTG
Product: penicillin acylase
Products: NA
Alternate protein names: Penicillin V amidase; PVA [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MVRITRNNDLVLKRYEGNSMKGFSKKVLLAASVAMAVGSISTAANACSRLVWETQDHGVFVSRTMDWMEANQPTIDVRHA GQTYRGYDKDDALTCTSKYASIGVSIYGVGIIDGFNEKGFAANALFLDEENPGAPQAGKQQIENSRFVAYLIDSFASVDE ALKNLASIQIQQFSHNGIEMKGHYSLEDASGDSAVLEYIDGAWQVHHGKQYDVMTNSPEYAQHLKNWQEAQPKAKSDVNG EFPIPGNINSAQRFIWNSYMKDQLKEPSSYTNGIAKLDSVTYKIPLDAANRPVNGEMRGYATIYGLVYNLDQKVMNVRYQ YDDSYTQYSVDFNKLNDGHNYTIKADLPDLFGDISSRLEKGDGVMGQHLVK
Sequences:
>Translated_371_residues MVRITRNNDLVLKRYEGNSMKGFSKKVLLAASVAMAVGSISTAANACSRLVWETQDHGVFVSRTMDWMEANQPTIDVRHA GQTYRGYDKDDALTCTSKYASIGVSIYGVGIIDGFNEKGFAANALFLDEENPGAPQAGKQQIENSRFVAYLIDSFASVDE ALKNLASIQIQQFSHNGIEMKGHYSLEDASGDSAVLEYIDGAWQVHHGKQYDVMTNSPEYAQHLKNWQEAQPKAKSDVNG EFPIPGNINSAQRFIWNSYMKDQLKEPSSYTNGIAKLDSVTYKIPLDAANRPVNGEMRGYATIYGLVYNLDQKVMNVRYQ YDDSYTQYSVDFNKLNDGHNYTIKADLPDLFGDISSRLEKGDGVMGQHLVK >Mature_371_residues MVRITRNNDLVLKRYEGNSMKGFSKKVLLAASVAMAVGSISTAANACSRLVWETQDHGVFVSRTMDWMEANQPTIDVRHA GQTYRGYDKDDALTCTSKYASIGVSIYGVGIIDGFNEKGFAANALFLDEENPGAPQAGKQQIENSRFVAYLIDSFASVDE ALKNLASIQIQQFSHNGIEMKGHYSLEDASGDSAVLEYIDGAWQVHHGKQYDVMTNSPEYAQHLKNWQEAQPKAKSDVNG EFPIPGNINSAQRFIWNSYMKDQLKEPSSYTNGIAKLDSVTYKIPLDAANRPVNGEMRGYATIYGLVYNLDQKVMNVRYQ YDDSYTQYSVDFNKLNDGHNYTIKADLPDLFGDISSRLEKGDGVMGQHLVK
Specific function: The enzyme catalyzes the conversion of penicillin to 6- aminopenicillanate The precursor, furthermore, acts as a self- processing peptidase that cleaves off the propeptide. All peptidase activity is lost on conversion to the mature peptidase [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.11 [H]
Molecular weight: Translated: 41346; Mature: 41346
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRITRNNDLVLKRYEGNSMKGFSKKVLLAASVAMAVGSISTAANACSRLVWETQDHGVF CEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEE VSRTMDWMEANQPTIDVRHAGQTYRGYDKDDALTCTSKYASIGVSIYGVGIIDGFNEKGF EEECHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHCCEEEEEEEEEECCCCCCC AANALFLDEENPGAPQAGKQQIENSRFVAYLIDSFASVDEALKNLASIQIQQFSHNGIEM EEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEE KGHYSLEDASGDSAVLEYIDGAWQVHHGKQYDVMTNSPEYAQHLKNWQEAQPKAKSDVNG ECCEEECCCCCCHHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC EFPIPGNINSAQRFIWNSYMKDQLKEPSSYTNGIAKLDSVTYKIPLDAANRPVNGEMRGY CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHH ATIYGLVYNLDQKVMNVRYQYDDSYTQYSVDFNKLNDGHNYTIKADLPDLFGDISSRLEK HEEHHHHHHHCHHHHEEEEEECCCEEEEEEEHHHCCCCCCEEEEECCHHHHHHHHHHHHH GDGVMGQHLVK CCCCCHHHHCC >Mature Secondary Structure MVRITRNNDLVLKRYEGNSMKGFSKKVLLAASVAMAVGSISTAANACSRLVWETQDHGVF CEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEE VSRTMDWMEANQPTIDVRHAGQTYRGYDKDDALTCTSKYASIGVSIYGVGIIDGFNEKGF EEECHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHCCEEEEEEEEEECCCCCCC AANALFLDEENPGAPQAGKQQIENSRFVAYLIDSFASVDEALKNLASIQIQQFSHNGIEM EEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEE KGHYSLEDASGDSAVLEYIDGAWQVHHGKQYDVMTNSPEYAQHLKNWQEAQPKAKSDVNG ECCEEECCCCCCHHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC EFPIPGNINSAQRFIWNSYMKDQLKEPSSYTNGIAKLDSVTYKIPLDAANRPVNGEMRGY CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHH ATIYGLVYNLDQKVMNVRYQYDDSYTQYSVDFNKLNDGHNYTIKADLPDLFGDISSRLEK HEEHHHHHHHCHHHHEEEEEECCCEEEEEEEHHHCCCCCCEEEEECCHHHHHHHHHHHHH GDGVMGQHLVK CCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3026906 [H]