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The map label for this gene is oruR [H]

Identifier: 156976484

GI number: 156976484

Start: 505541

End: 506539

Strand: Direct

Name: oruR [H]

Synonym: VIBHAR_05257

Alternate gene names: 156976484

Gene position: 505541-506539 (Clockwise)

Preceding gene: 156976483

Following gene: 156976486

Centisome position: 22.94

GC content: 47.35

Gene sequence:

>999_bases
ATGATCAAGCGAGCGAGTCAATTCACTGTGCCTCAGAGTTGGAAAGTGCTGCTTAACGATATGGATATTGATCCGCAACT
GGTGCTGGCATACGCCAAGTTACCTGCCGACCTGTTCAATCGAGAAAAGGCAACGCTTAGCCCAAATGAGTACTTTCAGC
TTTGGGTTGGAGTTGAGCAAGCGTCCGGAGAGCGCGAGATGCCGTTGCTCCTTGCTGAACATATGTCGGTTGAGGGATTT
GATGCCCCAATTTTTGCCGCTATTTGCAGTCCGAACTTGAACACCGCACTCAAACGGATTCAGCAATATAAGCCGTTGAT
TGGACCTATGGTAATGACGTTAGACGTTTCCGATAAAGAAACAAAACTCAGCATCAGTTGCTATGGCCAACGACAAGCTC
TACCCAAATCTTTGGCTTTGACAGAAGTGGTGTTCTTTACCCAGTTAGCACGTTTAGCGACGAGAAAGCGGATTCAACCG
CTACAAGTTACTTTACCTGAGCTTCCCAACAACCTTGAGAAATACCTAGCTTACTTTGGTTGCCCGTTGGTCAAAGGTGA
TGGCGTAGAGGCGCGTTTTAAAGCGGAAGATGCAGTGCATCCGTTCATGACTTTAAATGCGCAAATGTGGGGCTTTTTCG
AACAAGGGTTGAACCAGAAACTCAAAGATCTTGACGCCAGCGCCTCAACAGTTGAACGTGTTCGAGCAGTCTTGAGCGAG
TCATTACCCGCGGGGAACAGTGCTATTGAAATGGTGGCAGAGAAACTGGCAATGAGTAAACGTACATTGCAACGTAAGCT
CACGGCAGAAGCTGAAAGTTATCAATCCGTGCTGCAAATGGTACGGGCGGAGCTTGCCGATCACTATTTAGAGAAGTCTC
AAATGTCACTGGGTGAAATCTCCTTCCTACTGGGATTTCAAGAAGCGAACTCATTTATTCGAGCTTACAGCGCTTGGAAG
GGAATATCTCCCGGGCATTATCGAGACCAGTGTCATTAA

Upstream 100 bases:

>100_bases
TTTGAAGTTCATGCTTGAATGGATTGTGCCTTTCCTACCAAGAAAATTGGTGCTAAAAATATCGCGTCAAACCATGGAAA
AAAGTGCTTAGGAATCAAAT

Downstream 100 bases:

>100_bases
GCACAAAACGAATAGAAAGGAAAAGCGCCGAACATGTCGGCGCTTTTTTGAATGGTGCTTTTGTCCACACACCTTTCAAG
TTCTGTTTTTTACGTAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIKRASQFTVPQSWKVLLNDMDIDPQLVLAYAKLPADLFNREKATLSPNEYFQLWVGVEQASGEREMPLLLAEHMSVEGF
DAPIFAAICSPNLNTALKRIQQYKPLIGPMVMTLDVSDKETKLSISCYGQRQALPKSLALTEVVFFTQLARLATRKRIQP
LQVTLPELPNNLEKYLAYFGCPLVKGDGVEARFKAEDAVHPFMTLNAQMWGFFEQGLNQKLKDLDASASTVERVRAVLSE
SLPAGNSAIEMVAEKLAMSKRTLQRKLTAEAESYQSVLQMVRAELADHYLEKSQMSLGEISFLLGFQEANSFIRAYSAWK
GISPGHYRDQCH

Sequences:

>Translated_332_residues
MIKRASQFTVPQSWKVLLNDMDIDPQLVLAYAKLPADLFNREKATLSPNEYFQLWVGVEQASGEREMPLLLAEHMSVEGF
DAPIFAAICSPNLNTALKRIQQYKPLIGPMVMTLDVSDKETKLSISCYGQRQALPKSLALTEVVFFTQLARLATRKRIQP
LQVTLPELPNNLEKYLAYFGCPLVKGDGVEARFKAEDAVHPFMTLNAQMWGFFEQGLNQKLKDLDASASTVERVRAVLSE
SLPAGNSAIEMVAEKLAMSKRTLQRKLTAEAESYQSVLQMVRAELADHYLEKSQMSLGEISFLLGFQEANSFIRAYSAWK
GISPGHYRDQCH
>Mature_332_residues
MIKRASQFTVPQSWKVLLNDMDIDPQLVLAYAKLPADLFNREKATLSPNEYFQLWVGVEQASGEREMPLLLAEHMSVEGF
DAPIFAAICSPNLNTALKRIQQYKPLIGPMVMTLDVSDKETKLSISCYGQRQALPKSLALTEVVFFTQLARLATRKRIQP
LQVTLPELPNNLEKYLAYFGCPLVKGDGVEARFKAEDAVHPFMTLNAQMWGFFEQGLNQKLKDLDASASTVERVRAVLSE
SLPAGNSAIEMVAEKLAMSKRTLQRKLTAEAESYQSVLQMVRAELADHYLEKSQMSLGEISFLLGFQEANSFIRAYSAWK
GISPGHYRDQCH

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37300; Mature: 37300

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRASQFTVPQSWKVLLNDMDIDPQLVLAYAKLPADLFNREKATLSPNEYFQLWVGVEQ
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCCCCCHHHEEEEEEHHH
ASGEREMPLLLAEHMSVEGFDAPIFAAICSPNLNTALKRIQQYKPLIGPMVMTLDVSDKE
CCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCC
TKLSISCYGQRQALPKSLALTEVVFFTQLARLATRKRIQPLQVTLPELPNNLEKYLAYFG
CEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHC
CPLVKGDGVEARFKAEDAVHPFMTLNAQMWGFFEQGLNQKLKDLDASASTVERVRAVLSE
CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SLPAGNSAIEMVAEKLAMSKRTLQRKLTAEAESYQSVLQMVRAELADHYLEKSQMSLGEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SFLLGFQEANSFIRAYSAWKGISPGHYRDQCH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIKRASQFTVPQSWKVLLNDMDIDPQLVLAYAKLPADLFNREKATLSPNEYFQLWVGVEQ
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCCCCCHHHEEEEEEHHH
ASGEREMPLLLAEHMSVEGFDAPIFAAICSPNLNTALKRIQQYKPLIGPMVMTLDVSDKE
CCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCC
TKLSISCYGQRQALPKSLALTEVVFFTQLARLATRKRIQPLQVTLPELPNNLEKYLAYFG
CEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHC
CPLVKGDGVEARFKAEDAVHPFMTLNAQMWGFFEQGLNQKLKDLDASASTVERVRAVLSE
CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SLPAGNSAIEMVAEKLAMSKRTLQRKLTAEAESYQSVLQMVRAELADHYLEKSQMSLGEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SFLLGFQEANSFIRAYSAWKGISPGHYRDQCH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]