| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976475
Identifier: 156976475
GI number: 156976475
Start: 498488
End: 499024
Strand: Direct
Name: 156976475
Synonym: VIBHAR_05248
Alternate gene names: NA
Gene position: 498488-499024 (Clockwise)
Preceding gene: 156976474
Following gene: 156976476
Centisome position: 22.62
GC content: 47.67
Gene sequence:
>537_bases ATGAGACCAGTAAGCAAGGAACTTGGCGAGATTTGTTACCCATTCATCTATGAAGACAGCCCAGTATGTGACTTTGAAAT CACCGCTGATGAGTTGTGTAGCCGAATTGGGCTGGTTCTATCGATGGAACTCGATGACTTTAGCCGCGACATACTGACTC GAATGCAGCCAAACGTATATCATGTGAATGGCTCTATCCGCGGAAAACTCGCGATTACAGAAGCAGAAGTCGATGAGCTA AAAGCCGATTACGATGCAGTTAAGGCTCGTATCGACGGTGGATTTAAAGGATTTGTGCTTCCAGGCGGTCACCCAACGTC AAGCCAGTTGCATTTGTGTCGTTGCCAAGCAAAGAAGGTGGTTCGTGCATTGGTTGCCGTCGAGCATTCGGGTAAGAAGC ACCCCGACCCGATCTTGTTCCGCTATTCAAACCTGCTCGCAAATGTGCTCTACAGTCTGGCGTCTTACATCAACCACATT TATCAAGTCGAAGAAACTGAGTTCGTGTCTCGCAGCTACACAATGCCAAGTAAATAG
Upstream 100 bases:
>100_bases ATTTTCTAACTTATGATCGTCTAAACGGATGTGAATGCCGAAAGGGAGTTAGGTTATACTGACTCCCTTTTTTATTAGAA CCAAAGCACAGAGAAAGAGC
Downstream 100 bases:
>100_bases GCAAAATATCACCTAATAGTCTGAATTTAATGACTTTAAGCTAGCCGTCGCAGAGTTGTCATTCGAGTGCTTTGATTACC TTTACCCATCTTTCTACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Cobalamin Adenosyltransferase; Cobalmin Adenosyltransferase; Adenosyltransferase
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MRPVSKELGEICYPFIYEDSPVCDFEITADELCSRIGLVLSMELDDFSRDILTRMQPNVYHVNGSIRGKLAITEAEVDEL KADYDAVKARIDGGFKGFVLPGGHPTSSQLHLCRCQAKKVVRALVAVEHSGKKHPDPILFRYSNLLANVLYSLASYINHI YQVEETEFVSRSYTMPSK
Sequences:
>Translated_178_residues MRPVSKELGEICYPFIYEDSPVCDFEITADELCSRIGLVLSMELDDFSRDILTRMQPNVYHVNGSIRGKLAITEAEVDEL KADYDAVKARIDGGFKGFVLPGGHPTSSQLHLCRCQAKKVVRALVAVEHSGKKHPDPILFRYSNLLANVLYSLASYINHI YQVEETEFVSRSYTMPSK >Mature_178_residues MRPVSKELGEICYPFIYEDSPVCDFEITADELCSRIGLVLSMELDDFSRDILTRMQPNVYHVNGSIRGKLAITEAEVDEL KADYDAVKARIDGGFKGFVLPGGHPTSSQLHLCRCQAKKVVRALVAVEHSGKKHPDPILFRYSNLLANVLYSLASYINHI YQVEETEFVSRSYTMPSK
Specific function: Unknown
COG id: COG2096
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20046; Mature: 20046
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVSKELGEICYPFIYEDSPVCDFEITADELCSRIGLVLSMELDDFSRDILTRMQPNVY CCCHHHHHHHHHCCEEECCCCCCEEEECHHHHHHHHCEEEEECCCHHHHHHHHHCCCCEE HVNGSIRGKLAITEAEVDELKADYDAVKARIDGGFKGFVLPGGHPTSSQLHLCRCQAKKV EECCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH VRALVAVEHSGKKHPDPILFRYSNLLANVLYSLASYINHIYQVEETEFVSRSYTMPSK HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRPVSKELGEICYPFIYEDSPVCDFEITADELCSRIGLVLSMELDDFSRDILTRMQPNVY CCCHHHHHHHHHCCEEECCCCCCEEEECHHHHHHHHCEEEEECCCHHHHHHHHHCCCCEE HVNGSIRGKLAITEAEVDELKADYDAVKARIDGGFKGFVLPGGHPTSSQLHLCRCQAKKV EECCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH VRALVAVEHSGKKHPDPILFRYSNLLANVLYSLASYINHIYQVEETEFVSRSYTMPSK HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA