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The map label for this gene is 156976462

Identifier: 156976462

GI number: 156976462

Start: 488630

End: 489235

Strand: Reverse

Name: 156976462

Synonym: VIBHAR_05235

Alternate gene names: NA

Gene position: 489235-488630 (Counterclockwise)

Preceding gene: 156976464

Following gene: 156976460

Centisome position: 22.2

GC content: 48.18

Gene sequence:

>606_bases
ATGGTTATGCGCATTCTCCCCCTCTTACTCGCTCTGACAACGTTTTCTAGTACCACCATCGCCTATGAGCTTGATTACTA
CGCCAAGTTTGGCCATACCGACAACTACGGTAATATCGACCTACGAAATAAACCCTATACGACCATCCCTGATGGCTTAG
TCGTTAAAGGCAACCTCAATATTTCCCAGACGCCGATAACCAAACTTCCAAAAGGGCTTGATGTACAAGGCAGCCTTGAG
GCCACCAACAGCGCACTTAAAACGGTGAGACCCGGCATTAAAATTAAAGGCTACGCGAACTTACTCGGCAGTAAAATTGA
GCGCTGGCCACGCGGTATCAAACTGGGTGGCTACTTGAACCTCACAGATACGCCGTTAACGAGCTTGCCAGCGAGACTGA
GAGTAAAAGGCGACTTGAGCGTTATCCGTACGCCGCTAACGGAGCTACCTGAAGGTTTAGTGGTGGATGGTAACCTCTAT
ATCGGAGGTTCAAAGCTAACGACATTTCCCGATACCATGACAGTAAGAGGCAATATCTTCTTAGGGGGAAATAGAGTGAC
AAAGTGGCCAACAAACTTGACCTTAGGTGGTTCTGTTGCACCGTAG

Upstream 100 bases:

>100_bases
ATCACAAGTTCTTGGCAGCATCTCATATTCTTGTTAAGTGACGATGTAGCGGCTAACGGCGCTTTACGTTATCCTTTTCC
TGATTTTAGCAACGGTTGTG

Downstream 100 bases:

>100_bases
AGAGGGATGTTTCCAAAGACGCTTAAGTCAATGAAAGGAAGAAGGTCTAATGAGAGGAACGAGTTCAGAATCTAACAATA
ACACGCCTGAGATAGATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Leucine-Rich Repeat-Containing Protein

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MVMRILPLLLALTTFSSTTIAYELDYYAKFGHTDNYGNIDLRNKPYTTIPDGLVVKGNLNISQTPITKLPKGLDVQGSLE
ATNSALKTVRPGIKIKGYANLLGSKIERWPRGIKLGGYLNLTDTPLTSLPARLRVKGDLSVIRTPLTELPEGLVVDGNLY
IGGSKLTTFPDTMTVRGNIFLGGNRVTKWPTNLTLGGSVAP

Sequences:

>Translated_201_residues
MVMRILPLLLALTTFSSTTIAYELDYYAKFGHTDNYGNIDLRNKPYTTIPDGLVVKGNLNISQTPITKLPKGLDVQGSLE
ATNSALKTVRPGIKIKGYANLLGSKIERWPRGIKLGGYLNLTDTPLTSLPARLRVKGDLSVIRTPLTELPEGLVVDGNLY
IGGSKLTTFPDTMTVRGNIFLGGNRVTKWPTNLTLGGSVAP
>Mature_201_residues
MVMRILPLLLALTTFSSTTIAYELDYYAKFGHTDNYGNIDLRNKPYTTIPDGLVVKGNLNISQTPITKLPKGLDVQGSLE
ATNSALKTVRPGIKIKGYANLLGSKIERWPRGIKLGGYLNLTDTPLTSLPARLRVKGDLSVIRTPLTELPEGLVVDGNLY
IGGSKLTTFPDTMTVRGNIFLGGNRVTKWPTNLTLGGSVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21786; Mature: 21786

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMRILPLLLALTTFSSTTIAYELDYYAKFGHTDNYGNIDLRNKPYTTIPDGLVVKGNLN
CHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCC
ISQTPITKLPKGLDVQGSLEATNSALKTVRPGIKIKGYANLLGSKIERWPRGIKLGGYLN
CCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEECCEEE
LTDTPLTSLPARLRVKGDLSVIRTPLTELPEGLVVDGNLYIGGSKLTTFPDTMTVRGNIF
ECCCCCCCCCEEEEEECCHHHEECCHHHCCCCEEEECEEEECCCEEEECCCCEEEEEEEE
LGGNRVTKWPTNLTLGGSVAP
ECCCEEEECCCCEEECCCCCC
>Mature Secondary Structure
MVMRILPLLLALTTFSSTTIAYELDYYAKFGHTDNYGNIDLRNKPYTTIPDGLVVKGNLN
CHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCC
ISQTPITKLPKGLDVQGSLEATNSALKTVRPGIKIKGYANLLGSKIERWPRGIKLGGYLN
CCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEECCEEE
LTDTPLTSLPARLRVKGDLSVIRTPLTELPEGLVVDGNLYIGGSKLTTFPDTMTVRGNIF
ECCCCCCCCCEEEEEECCHHHEECCHHHCCCCEEEECEEEECCCEEEECCCCEEEEEEEE
LGGNRVTKWPTNLTLGGSVAP
ECCCEEEECCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA