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The map label for this gene is 156976450

Identifier: 156976450

GI number: 156976450

Start: 476941

End: 477858

Strand: Reverse

Name: 156976450

Synonym: VIBHAR_05223

Alternate gene names: NA

Gene position: 477858-476941 (Counterclockwise)

Preceding gene: 156976452

Following gene: 156976449

Centisome position: 21.68

GC content: 47.17

Gene sequence:

>918_bases
ATGGTTTATTTGCTTCCGTTTTTTACTGTCATGATTTGGGGTGGAAATTCCATCGTAAATAAAATGGCAGCAAGTGCCAT
CGAACCAAGTGCCATGAGCTTCTATCGTTGGTTTGTCGCTATGGTGCTTCTGACGCCATTTTGCTTACCAGCGGTTATCA
AACAGCGCCATGTGATTCGCCCATACTTGGCTAAGTTAGCGTTCCTTGCGCTACTGGGCATGGTACTAAACCAATCACTC
GGCTATTACGCGGGTCTTACGACTACCGCTTCTAACATGGCACTGATTACCTCTCTCGTCCCATTGATCAGTGTTTTCTT
GAGTGTGCCTTTATTGGGTAAGTCGATTTCCATGCTGAGCGTGGCAGGTGGCGTGATTTCATTAGGCGGTTTGGCGTTTA
TGCTGGGTCACGGTGACATAACCTACTTCCTACATCAAGACATGACGCAAGGTGACAGTCTGATGCTGTTAGCTGCCCTT
TGTTACGCGATTTACTGTGTGCTACTAAAACGCTGGAAAATGCCTTTCAGCAGCATGACCTTGGTCTATATGCAGGGTTT
TTTCTCATTGGTTATGCTTGCGCCATTGTGGCTAAGCAGCGATCAACTTCTACCAAGCCAAAGCGCATTACCTTTAATTG
CTTACGCTGGTATTGCCGCGTCTATCTTTGCTCCATTGATGTGGGTAAAAGCGATTGAGTTGATTGGTGCAGACTCAAGT
GCCATGTTCATGAACCTGATGCCTGTGGTTTCGGTAGCCCTCGCCTCAACCATGCTCGGCGAAGAAGTTCATGTTTACCA
CATCATTGGCGGCATGCTGGTTATCTCTGGCGTTATCTTGTCGCAAATAAGATCCGCAAGAAGGTTCAATCACCGAGCCC
GGAGCTGCCACCTGCGACATCTTAATTCAATCTCATAA

Upstream 100 bases:

>100_bases
AAATTTGTCTTCCTATCGCTTACGATGTCTTTCCAGAGATACATTTCATTATAAAGACCTGTCAGACTAGCGCCATTAAT
TATTCTGCGATGAGGTTCTC

Downstream 100 bases:

>100_bases
GCCACGGCACCACCGTGGCTTTTTTGTGCCCCATATCTGTTGCTGCTAGTACTGACAAAAAAGTTAATATTTTGTTGCAC
TCCCTATTCCAGTATCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MVYLLPFFTVMIWGGNSIVNKMAASAIEPSAMSFYRWFVAMVLLTPFCLPAVIKQRHVIRPYLAKLAFLALLGMVLNQSL
GYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSISMLSVAGGVISLGGLAFMLGHGDITYFLHQDMTQGDSLMLLAAL
CYAIYCVLLKRWKMPFSSMTLVYMQGFFSLVMLAPLWLSSDQLLPSQSALPLIAYAGIAASIFAPLMWVKAIELIGADSS
AMFMNLMPVVSVALASTMLGEEVHVYHIIGGMLVISGVILSQIRSARRFNHRARSCHLRHLNSIS

Sequences:

>Translated_305_residues
MVYLLPFFTVMIWGGNSIVNKMAASAIEPSAMSFYRWFVAMVLLTPFCLPAVIKQRHVIRPYLAKLAFLALLGMVLNQSL
GYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSISMLSVAGGVISLGGLAFMLGHGDITYFLHQDMTQGDSLMLLAAL
CYAIYCVLLKRWKMPFSSMTLVYMQGFFSLVMLAPLWLSSDQLLPSQSALPLIAYAGIAASIFAPLMWVKAIELIGADSS
AMFMNLMPVVSVALASTMLGEEVHVYHIIGGMLVISGVILSQIRSARRFNHRARSCHLRHLNSIS
>Mature_305_residues
MVYLLPFFTVMIWGGNSIVNKMAASAIEPSAMSFYRWFVAMVLLTPFCLPAVIKQRHVIRPYLAKLAFLALLGMVLNQSL
GYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSISMLSVAGGVISLGGLAFMLGHGDITYFLHQDMTQGDSLMLLAAL
CYAIYCVLLKRWKMPFSSMTLVYMQGFFSLVMLAPLWLSSDQLLPSQSALPLIAYAGIAASIFAPLMWVKAIELIGADSS
AMFMNLMPVVSVALASTMLGEEVHVYHIIGGMLVISGVILSQIRSARRFNHRARSCHLRHLNSIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33297; Mature: 33297

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYLLPFFTVMIWGGNSIVNKMAASAIEPSAMSFYRWFVAMVLLTPFCLPAVIKQRHVIR
CEEHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYLAKLAFLALLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSISMLS
HHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VAGGVISLGGLAFMLGHGDITYFLHQDMTQGDSLMLLAALCYAIYCVLLKRWKMPFSSMT
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVYMQGFFSLVMLAPLWLSSDQLLPSQSALPLIAYAGIAASIFAPLMWVKAIELIGADSS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AMFMNLMPVVSVALASTMLGEEVHVYHIIGGMLVISGVILSQIRSARRFNHRARSCHLRH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNSIS
HCCCC
>Mature Secondary Structure
MVYLLPFFTVMIWGGNSIVNKMAASAIEPSAMSFYRWFVAMVLLTPFCLPAVIKQRHVIR
CEEHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYLAKLAFLALLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSISMLS
HHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VAGGVISLGGLAFMLGHGDITYFLHQDMTQGDSLMLLAALCYAIYCVLLKRWKMPFSSMT
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVYMQGFFSLVMLAPLWLSSDQLLPSQSALPLIAYAGIAASIFAPLMWVKAIELIGADSS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AMFMNLMPVVSVALASTMLGEEVHVYHIIGGMLVISGVILSQIRSARRFNHRARSCHLRH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNSIS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]