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The map label for this gene is lpsE [H]

Identifier: 156976429

GI number: 156976429

Start: 457318

End: 458370

Strand: Reverse

Name: lpsE [H]

Synonym: VIBHAR_05202

Alternate gene names: 156976429

Gene position: 458370-457318 (Counterclockwise)

Preceding gene: 156976430

Following gene: 156976428

Centisome position: 20.8

GC content: 46.72

Gene sequence:

>1053_bases
ATGAAGAAGAAAATACTGCATATTATCAATGACCTATCAAAGAACGGTGGCGCACAGAAGTTTCTCGTCGACTTGGTGAT
GGAGCACTCACCGGAGTATGAAATCAAAGTCCTCGTACTTTGCGATGACAACGATTATTTGGCGCAGCTCACTTCTCGTG
GCATCGAGTGTTTTAATTGGCAGGCCCTGACGATTAAAGAGAAATGGTCTTTATTACGCTGGCCAGATCTCGTGCATGGG
CACTTGTACCCATCTATCTATCTGGCATTGCTTGCCATTGGTAAAAAGCGCATTCAAACCGAGCACTGTTCATACAACCG
CCGTCGTGACTACCCGTTATTTAAATTTATGGAATACCTACTTTATCGTGGGCACGATCTGACGGTTAGCATCAGTGAAA
AAGTCCAAGAAGAACTGGTAAAGTTCATGCCTCGTTTTGAGCATAAATATCGTGTTGTCCATAATGGTGTCGATCTCGCT
CGCTTCCCTCTTGCAGCTAAGTCTGGAAGCCTCTTAAGGGAGAAATCAGCCATCAATATCGGTATGGTCGGGCGACTTCA
TGAACATAAAGATCATGAGACGCTAATCCACTCGATTGCCCTTCTTCCTACCAATTATCATCTCCACTTAGCTGGAGACG
GAGCGAAACGCGGTGAACTCGAACCTCTCACTCAGAGCCTGAATATTGCCGATCGTGTTCATTTCCACGGTGTGGTATCC
GATATCCCCGCTTTTTTGTCTGGCATGGACGTGTATGTTCAATCATCCCATGTTGAAGGTTTTGGCCTTGCGGCTGTAGA
AGCGATGGCGGCAGGCTTACCTGTGCTGTCTTCAGATGTGCCGGGGTTAGATGAAGTGATGGGCAGCCATGAATATTTGT
TCACGGTCGGTGAATCAGAGCAACTAGCAGACAAAATATCTCGACTATGCAATGCCGTTGACCTCTACGATAGCGCCAGT
GAATACGCAGTGAATCGTGCCAAGTTATACACCATCGATAAATTCCGAGACGGGTACTATGGACTCTACCAACAGCTCTG
CACCAGCAAGTAA

Upstream 100 bases:

>100_bases
CTGTGTTTGTCGAGGAGATGCTGTCATCGAAACTGACCAAGCATTTCTTTGCTGAGCCTGAAATCGAAAAGTTCAAACAA
AAGTATCTAGCGACTGAGTC

Downstream 100 bases:

>100_bases
CCTTGTACCGCTGTTTGCAGCGATTACTCTCGCGCTATTTTTTGTTCCAATAAAGATAGGACTTGGTGGTATTGCTCTCG
CACCGTCAGATATCACAAGC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKKKILHIINDLSKNGGAQKFLVDLVMEHSPEYEIKVLVLCDDNDYLAQLTSRGIECFNWQALTIKEKWSLLRWPDLVHG
HLYPSIYLALLAIGKKRIQTEHCSYNRRRDYPLFKFMEYLLYRGHDLTVSISEKVQEELVKFMPRFEHKYRVVHNGVDLA
RFPLAAKSGSLLREKSAINIGMVGRLHEHKDHETLIHSIALLPTNYHLHLAGDGAKRGELEPLTQSLNIADRVHFHGVVS
DIPAFLSGMDVYVQSSHVEGFGLAAVEAMAAGLPVLSSDVPGLDEVMGSHEYLFTVGESEQLADKISRLCNAVDLYDSAS
EYAVNRAKLYTIDKFRDGYYGLYQQLCTSK

Sequences:

>Translated_350_residues
MKKKILHIINDLSKNGGAQKFLVDLVMEHSPEYEIKVLVLCDDNDYLAQLTSRGIECFNWQALTIKEKWSLLRWPDLVHG
HLYPSIYLALLAIGKKRIQTEHCSYNRRRDYPLFKFMEYLLYRGHDLTVSISEKVQEELVKFMPRFEHKYRVVHNGVDLA
RFPLAAKSGSLLREKSAINIGMVGRLHEHKDHETLIHSIALLPTNYHLHLAGDGAKRGELEPLTQSLNIADRVHFHGVVS
DIPAFLSGMDVYVQSSHVEGFGLAAVEAMAAGLPVLSSDVPGLDEVMGSHEYLFTVGESEQLADKISRLCNAVDLYDSAS
EYAVNRAKLYTIDKFRDGYYGLYQQLCTSK
>Mature_350_residues
MKKKILHIINDLSKNGGAQKFLVDLVMEHSPEYEIKVLVLCDDNDYLAQLTSRGIECFNWQALTIKEKWSLLRWPDLVHG
HLYPSIYLALLAIGKKRIQTEHCSYNRRRDYPLFKFMEYLLYRGHDLTVSISEKVQEELVKFMPRFEHKYRVVHNGVDLA
RFPLAAKSGSLLREKSAINIGMVGRLHEHKDHETLIHSIALLPTNYHLHLAGDGAKRGELEPLTQSLNIADRVHFHGVVS
DIPAFLSGMDVYVQSSHVEGFGLAAVEAMAAGLPVLSSDVPGLDEVMGSHEYLFTVGESEQLADKISRLCNAVDLYDSAS
EYAVNRAKLYTIDKFRDGYYGLYQQLCTSK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39707; Mature: 39707

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKILHIINDLSKNGGAQKFLVDLVMEHSPEYEIKVLVLCDDNDYLAQLTSRGIECFNW
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCEEECE
QALTIKEKWSLLRWPDLVHGHLYPSIYLALLAIGKKRIQTEHCSYNRRRDYPLFKFMEYL
EEEEEHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LYRGHDLTVSISEKVQEELVKFMPRFEHKYRVVHNGVDLARFPLAAKSGSLLREKSAINI
HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHCCCCE
GMVGRLHEHKDHETLIHSIALLPTNYHLHLAGDGAKRGELEPLTQSLNIADRVHFHGVVS
EEECCHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHH
DIPAFLSGMDVYVQSSHVEGFGLAAVEAMAAGLPVLSSDVPGLDEVMGSHEYLFTVGESE
HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHCCCEEEEEECCHH
QLADKISRLCNAVDLYDSASEYAVNRAKLYTIDKFRDGYYGLYQQLCTSK
HHHHHHHHHHHHHHHHCCHHHHHHCHHEEEEEHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKKILHIINDLSKNGGAQKFLVDLVMEHSPEYEIKVLVLCDDNDYLAQLTSRGIECFNW
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCEEECE
QALTIKEKWSLLRWPDLVHGHLYPSIYLALLAIGKKRIQTEHCSYNRRRDYPLFKFMEYL
EEEEEHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LYRGHDLTVSISEKVQEELVKFMPRFEHKYRVVHNGVDLARFPLAAKSGSLLREKSAINI
HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHCCCCE
GMVGRLHEHKDHETLIHSIALLPTNYHLHLAGDGAKRGELEPLTQSLNIADRVHFHGVVS
EEECCHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHH
DIPAFLSGMDVYVQSSHVEGFGLAAVEAMAAGLPVLSSDVPGLDEVMGSHEYLFTVGESE
HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHCCCEEEEEECCHH
QLADKISRLCNAVDLYDSASEYAVNRAKLYTIDKFRDGYYGLYQQLCTSK
HHHHHHHHHHHHHHHHCCHHHHHHCHHEEEEEHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]